Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 AC007346.2-201ENST00000564816 892 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 AC006115.2-201ENST00000596823 202 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AL135999.3-201ENST00000610501 812 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 uc_338.31-201ENST00000615595 186 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AL357153.4-201ENST00000620487 1016 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AL591926.1-201ENST00000620542 217 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.57□□□□□ -1.52
PDLIM1O00151 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDLIM1O00151 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM1O00151 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 THAP12P9-201ENST00000503971 2360 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
PDLIM1O00151 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM1O00151 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PDLIM1O00151 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 SNORA70.6-201ENST00000383934 134 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 YWHAZP6-201ENST00000399764 738 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AL050305.1-201ENST00000399993 1230 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AL035422.1-201ENST00000414193 397 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AL355994.1-201ENST00000424379 260 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AL139158.1-201ENST00000424719 340 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AL589765.3-201ENST00000446084 462 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 SDC4P-201ENST00000453285 601 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM1O00151 OR7E157P-201ENST00000494376 911 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AC112184.1-201ENST00000505179 312 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 OR7E99P-201ENST00000505750 922 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AC018797.1-201ENST00000510791 255 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AC024405.1-201ENST00000532521 1042 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AC090424.1-201ENST00000535243 736 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 AC107958.1-201ENST00000556576 290 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM1O00151 SMIM12P1-201ENST00000603004 274 ntBASIC5.56□□□□□ -1.52
PDLIM1O00151 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM1O00151 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM1O00151 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PDLIM1O00151 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDLIM1O00151 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM1O00151 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM1O00151 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM1O00151 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 RNU1-146P-201ENST00000364015 165 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM1O00151 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 MYL6P5-201ENST00000412707 459 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM1O00151 AL354893.1-201ENST00000433735 348 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC068491.1-201ENST00000449539 1241 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC020779.1-201ENST00000478757 796 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 RN7SL741P-201ENST00000482473 289 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC113367.2-201ENST00000505749 160 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC112484.3-201ENST00000505910 329 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 RNA5SP473-201ENST00000516402 125 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM1O00151 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC090022.1-201ENST00000546569 311 ntBASIC5.55□□□□□ -1.52
PDLIM1O00151 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM1O00151 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM1O00151 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM1O00151 MIR4701-201ENST00000583094 63 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms