Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC133963.2-201ENST00000513686 578 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SKP157-201ENST00000516174 282 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC013701.1-201ENST00000522657 465 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 BCAS2P1-201ENST00000528022 632 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC087894.1-201ENST00000538359 518 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AL845552.1-201ENST00000556820 323 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 MIR4502-201ENST00000580432 81 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC005332.4-201ENST00000592752 579 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 BNIP3P40-201ENST00000596017 556 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC079610.2-201ENST00000604818 690 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AL158050.2-201ENST00000605336 568 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC024589.2-201ENST00000605642 1294 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AL357140.4-201ENST00000636827 412 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 HSPD1P11-201ENST00000508643 1702 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AL442128.2-201ENST00000620246 1824 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 AC007114.2-201ENST00000576014 4281 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 MAPK10-261ENST00000641050 3109 ntBASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
COL4A3BPQ9Y5P4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL4A3BPQ9Y5P4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
COL4A3BPQ9Y5P4 AC092451.3-201ENST00000625067 1343 ntBASIC7.02□□□□□ -1.28
COL4A3BPQ9Y5P4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
COL4A3BPQ9Y5P4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RNU6-666P-201ENST00000363499 107 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 SNORA70H-201ENST00000383910 135 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 SNORA70J-201ENST00000384182 135 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AP002784.2-201ENST00000397300 549 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RPL5P19-201ENST00000404228 893 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RSL24D1P1-201ENST00000404972 493 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC013262.1-201ENST00000426710 252 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RPSAP65-201ENST00000429660 595 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC006994.1-201ENST00000438212 839 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CACYBPP1-201ENST00000438592 684 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 SOCS5P1-201ENST00000440415 949 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AL645936.1-201ENST00000441979 518 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC092967.1-201ENST00000449016 481 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 VPS25P1-201ENST00000455691 508 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RN7SL254P-201ENST00000460609 284 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 KHDC1P1-201ENST00000511053 508 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC122134.1-201ENST00000565664 1104 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC002519.2-203ENST00000567043 837 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC106734.1-201ENST00000568646 663 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC245100.7-201ENST00000609678 442 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC104763.3-201ENST00000613765 618 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 MIR7159-201ENST00000620587 66 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AP001052.1-201ENST00000626421 99 ntBASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
COL4A3BPQ9Y5P4 BIN2P1-201ENST00000504996 1530 ntBASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.01□□□□□ -1.29
COL4A3BPQ9Y5P4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms