Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CTDP1Q9Y5B0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 NPM1P48-201ENST00000436002 853 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC005077.1-201ENST00000449226 375 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 PPIAP20-201ENST00000449839 135 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CLIC4P1-201ENST00000453177 535 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 SETP20-201ENST00000457046 852 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CST12P-201ENST00000457644 362 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AP002371.1-201ENST00000463604 433 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC128716.1-201ENST00000475129 166 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC092865.4-201ENST00000477936 615 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 RPL7P51-201ENST00000490532 749 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC082651.2-201ENST00000496833 166 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 ATG10-AS1-201ENST00000504846 648 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC104997.1-201ENST00000519761 717 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC113192.3-201ENST00000529152 742 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AP000943.4-201ENST00000622912 357 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC012254.5-201ENST00000623573 478 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC129915.3-201ENST00000634128 948 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC099654.9-201ENST00000637055 678 ntBASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CTDP1Q9Y5B0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 PROS2P-201ENST00000474651 1951 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC092724.1-201ENST00000624623 3397 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 RBMY1HP-201ENST00000382759 1389 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CASC19-255ENST00000641733 1385 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC022325.1-201ENST00000502748 2199 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC007068.1-201ENST00000396690 844 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC069282.1-201ENST00000411911 526 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 USP12PY-201ENST00000427677 1064 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 TRIM60P16-201ENST00000444048 694 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC104849.1-201ENST00000462623 405 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 OR2A3P-201ENST00000493774 953 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 WBP1LP3-201ENST00000523033 208 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC073916.1-201ENST00000545095 130 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC092121.1-201ENST00000569452 202 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 MTATP6P24-201ENST00000576835 677 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC087468.1-201ENST00000604365 630 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC100767.2-201ENST00000604840 693 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC008555.7-201ENST00000605008 583 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AL645933.2-201ENST00000606743 1207 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 AC068787.1-201ENST00000623908 691 ntBASIC7.11□□□□□ -1.27
CTDP1Q9Y5B0 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms