Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC015720.2-201ENST00000567709 334 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AL353729.2-201ENST00000605859 1249 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 AC008115.3-201ENST00000614874 549 ntBASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
NPC1L1Q9UHC9 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 MAPK10-270ENST00000641102 3538 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AC089998.1-201ENST00000548575 3141 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AC093297.3-201ENST00000607056 2517 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AC010401.2-201ENST00000575137 4934 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 MRPS21P3-201ENST00000436696 262 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AL390119.1-201ENST00000440329 312 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 EIF1P7-201ENST00000487533 337 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 SDR42E1P1-201ENST00000611327 477 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.56□□□□□ -1.2
NPC1L1Q9UHC9 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AL009179.1-201ENST00000406085 265 ntBASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC073072.2-201ENST00000447425 348 ntBASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 SEPT10P1-201ENST00000517342 1162 ntBASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC005618.4-201ENST00000625053 554 ntBASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 AC000095.2-202ENST00000637415 154 ntBASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
NPC1L1Q9UHC9 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC018809.2-201ENST00000602436 3823 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 MARK2P4-201ENST00000503381 2380 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 MIR937-201ENST00000401271 86 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 RN7SKP17-201ENST00000411242 351 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 YWHAEP1-201ENST00000453697 763 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 SBDSP1-204ENST00000453858 737 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 COX6B1P2-201ENST00000489624 230 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 AC084824.2-201ENST00000548906 345 ntBASIC7.54□□□□□ -1.2
NPC1L1Q9UHC9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms