Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC079064.1-201ENST00000528365 362 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AL356801.1-201ENST00000559320 294 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC009237.13-201ENST00000603193 276 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC245014.3-201ENST00000618589 347 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 PWAR1-201ENST00000624188 2414 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL359715.3-201ENST00000569267 2123 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL159987.1-201ENST00000347911 293 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 MIR191-201ENST00000384873 92 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL034417.1-201ENST00000399343 800 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 BX284632.2-201ENST00000421091 399 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL139158.1-201ENST00000424719 340 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 VN1R110P-201ENST00000438988 971 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC073465.2-201ENST00000440938 498 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL512605.1-202ENST00000441919 381 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 RPL6P30-201ENST00000443382 862 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AL359955.2-201ENST00000445380 353 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 TAAR4P-201ENST00000454843 1039 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 CEACAMP11-201ENST00000455211 583 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 RN7SL568P-201ENST00000493069 298 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 SCARNA18.1-201ENST00000516330 83 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 RNA5SP340-201ENST00000517132 107 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 PMS2P3-207ENST00000529061 717 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AP004609.2-201ENST00000532177 190 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 PCNAP4-201ENST00000532690 730 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 OR4A41P-201ENST00000533053 928 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 HSPE1P2-201ENST00000554777 306 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 MIR4260-201ENST00000583107 67 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC011500.1-201ENST00000601963 469 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 MIR6793-201ENST00000612376 63 ntBASIC5.32□□□□□ -1.56
VAPAQ9P0L0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VAPAQ9P0L0 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 GAPDHP24-201ENST00000328713 983 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 RN7SKP250-201ENST00000363924 321 ntBASIC5.31□□□□□ -1.56
VAPAQ9P0L0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VAPAQ9P0L0 AL136231.1-201ENST00000429407 730 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms