Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 U3.10-201ENST00000364459 214 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 DHFRP5-201ENST00000406944 564 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC115283.1-201ENST00000427353 400 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AL590399.4-201ENST00000436561 601 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HLA-DPA3-207ENST00000454398 229 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 RPS17P15-201ENST00000475609 349 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 GAPDHP71-201ENST00000511530 1003 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HMGN2P36-201ENST00000529541 409 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 NANOGNBP2-201ENST00000544753 553 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC096996.1-201ENST00000563813 325 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AL513327.3-201ENST00000602618 469 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC022400.9-201ENST00000623633 273 ntBASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BLOC1S4Q9NUP1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
BLOC1S4Q9NUP1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
BLOC1S4Q9NUP1 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
BLOC1S4Q9NUP1 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AL672167.2-201ENST00000377164 879 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AL512637.1-201ENST00000439523 1231 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 EIF5AP4-201ENST00000441206 465 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 HMGN1P2-201ENST00000445197 310 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 RPL31P20-201ENST00000449593 360 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC093719.1-201ENST00000480427 441 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 PDCL3P4-201ENST00000489621 720 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AK4P6-201ENST00000505168 528 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC006499.4-201ENST00000510947 694 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC060780.2-201ENST00000589047 198 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AP002884.5-201ENST00000595053 1132 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AL159169.2-201ENST00000610061 1269 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC129915.3-201ENST00000634128 948 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 AC010329.1-201ENST00000593903 8328 ntBASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
BLOC1S4Q9NUP1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 RNU6-618P-201ENST00000363518 112 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AL035660.1-201ENST00000422041 222 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC021876.1-201ENST00000425959 359 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC126120.1-201ENST00000431082 470 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC242426.1-201ENST00000435270 960 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 RPSAP37-201ENST00000470913 821 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC099521.1-201ENST00000482557 334 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 OR9N1P-201ENST00000491296 333 ntBASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.45□□□□□ -1.38
BLOC1S4Q9NUP1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms