Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC121161.1-201ENST00000510606 652 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 SETP21-201ENST00000514799 892 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 SNORA81.2-201ENST00000516868 170 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC073916.1-201ENST00000545095 130 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC106730.2-201ENST00000566641 540 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC007275.1-201ENST00000621243 671 ntBASIC6.94□□□□□ -1.3
VTA1Q9NP79 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
VTA1Q9NP79 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
VTA1Q9NP79 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AL356317.1-201ENST00000396110 1436 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC132825.1-201ENST00000463573 2247 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 TMSB4XP4-201ENST00000323496 618 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 SNORA51.1-201ENST00000363243 140 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AL451046.1-201ENST00000406097 534 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 NIFKP3-201ENST00000417799 865 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 RPL7P33-201ENST00000444159 742 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AL161636.2-201ENST00000445179 927 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 ZNF619P1-201ENST00000446539 752 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 RPL23AP23-201ENST00000452590 471 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 RPSAP37-201ENST00000470913 821 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 RN7SL205P-201ENST00000490174 284 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC112518.2-201ENST00000508565 425 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 IGHV1-14-201ENST00000523391 241 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AP001372.4-201ENST00000524889 472 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AP000648.1-201ENST00000529682 397 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC079600.1-201ENST00000550326 297 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC124283.4-201ENST00000581815 456 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC027229.1-201ENST00000583887 253 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC006116.5-201ENST00000591936 559 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AL031601.1-201ENST00000605702 394 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC005021.1-201ENST00000608730 355 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 RMST_5.1-201ENST00000618704 126 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 MIR6886-201ENST00000619864 61 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC084824.4-201ENST00000620106 731 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC090617.9-201ENST00000623751 147 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC013437.2-201ENST00000639587 677 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 OR7A1P-202ENST00000641542 1158 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
VTA1Q9NP79 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 AC005034.3-201ENST00000604845 1747 ntBASIC6.93□□□□□ -1.3
VTA1Q9NP79 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
VTA1Q9NP79 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VTA1Q9NP79 AC120036.2-201ENST00000509729 1474 ntBASIC6.92□□□□□ -1.3
VTA1Q9NP79 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms