Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 AC114774.1-201ENST00000507410 1770 ntBASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCSER1Q9C0I3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL161912.4-201ENST00000623889 2468 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 RNA5SP326-201ENST00000363209 110 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 RANP7-201ENST00000418085 644 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AC127526.2-201ENST00000426436 775 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AP006222.1-205ENST00000450734 457 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AC022215.1-201ENST00000481770 362 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 IGLV3-24-201ENST00000517477 197 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 OR8Q1P-201ENST00000526467 655 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL353729.2-201ENST00000605859 1249 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL353684.1-201ENST00000622677 1120 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AC132825.8-201ENST00000640783 297 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 GTF2IP4-201ENST00000453092 2054 ntBASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.38□□□□□ -1.39
CCSER1Q9C0I3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AL121886.1-201ENST00000358609 435 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 RPS3AP2-201ENST00000407190 754 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 RPS3P2-201ENST00000421346 701 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AL389925.1-201ENST00000432257 728 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 HMGB3P24-201ENST00000433260 622 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 RPL23AP19-201ENST00000436229 369 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AL596266.1-201ENST00000448132 400 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 RPS23P6-201ENST00000466136 431 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SNORA70.20-201ENST00000516848 126 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AC020656.2-201ENST00000613291 5309 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 OR4F13P-202ENST00000560066 2054 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 AC006206.1-201ENST00000544842 3387 ntBASIC6.37□□□□□ -1.39
CCSER1Q9C0I3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 NEPNP-201ENST00000404786 1371 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 RNU11-201ENST00000387069 134 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC245060.4-201ENST00000413293 1121 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 CDY17P-201ENST00000414121 1282 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 TMEM183AP1-205ENST00000432739 290 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 NANOGP9-201ENST00000439890 892 ntBASIC6.36□□□□□ -1.39
CCSER1Q9C0I3 AC073109.1-201ENST00000445066 978 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms