Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC069307.1-201ENST00000602820 447 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 MIR378J-201ENST00000611988 109 ntBASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SCAPERQ9BY12 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 CPS1-IT1-201ENST00000628368 2306 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 RNU4-4P-201ENST00000364588 130 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 TMA16P2-201ENST00000413187 601 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 FAM96AP1-201ENST00000430879 482 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 AC096775.1-201ENST00000437724 448 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 RPL7L1P3-201ENST00000455249 689 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 RNU1-88P-201ENST00000459274 128 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 RPS3AP41-201ENST00000462701 778 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 FTH1P8-201ENST00000498161 514 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 DPPA3P2-202ENST00000557188 1219 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 NMNAT1P5-201ENST00000559657 841 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 AC004836.1-201ENST00000623032 634 ntBASIC8.47□□□□□ -1.05
SCAPERQ9BY12 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SCAPERQ9BY12 SNORD8-201ENST00000363915 110 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 SNORA16A-201ENST00000384342 137 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 SNORA11-201ENST00000408789 128 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 RAB28P1-201ENST00000411517 641 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AL360081.1-201ENST00000428299 555 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AL672167.3-201ENST00000465951 960 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AP004607.2-201ENST00000533949 322 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AC127381.1-201ENST00000555979 939 ntBASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
SCAPERQ9BY12 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC007568.1-201ENST00000422912 471 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 GSTA7P-201ENST00000438425 448 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 CEACAMP9-201ENST00000442990 513 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 RPS29P33-201ENST00000456717 146 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 RPS23P2-201ENST00000463671 415 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 RPL10P14-201ENST00000565265 298 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC114947.2-201ENST00000565748 2125 ntBASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.46□□□□□ -1.06
SCAPERQ9BY12 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms