Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MIR6732-201ENST00000619365 60 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MIR193BHG-214ENST00000641765 509 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MAPK10-313ENST00000641405 2469 ntBASIC7.61□□□□□ -1.19
USB1Q9BQ65 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
USB1Q9BQ65 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
USB1Q9BQ65 AC068870.3-201ENST00000625077 2536 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 CCT8P1-201ENST00000413611 1657 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 RNU6-1120P-201ENST00000362988 108 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 ANXA2P3-201ENST00000404883 1008 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 Y_RNA.618-201ENST00000410949 107 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 RNA5SP498-201ENST00000411342 120 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 UQCRHP2-201ENST00000415651 288 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC092634.6-201ENST00000418558 192 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 COX6CP17-201ENST00000421389 185 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 RPL5P34-201ENST00000426545 891 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL606752.1-201ENST00000435442 666 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL021939.1-201ENST00000441868 886 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 NBPF2P-201ENST00000453025 661 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 RN7SL761P-201ENST00000463259 278 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 MTND4P17-201ENST00000470444 350 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 RN7SL841P-201ENST00000470547 297 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 RNU6-1314P-201ENST00000517139 104 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 IGLV1-41-201ENST00000519790 406 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 PSMA2P1-201ENST00000526365 646 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC093519.1-201ENST00000566109 298 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AL669831.4-202ENST00000590817 238 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC243960.5-201ENST00000597858 255 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC021646.1-201ENST00000605469 484 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC006924.1-201ENST00000610750 559 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 FAM30B-201ENST00000611556 397 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC005383.1-201ENST00000622689 534 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC009161.2-201ENST00000624626 138 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 AC016831.3-201ENST00000446451 1723 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 MTND4P1-201ENST00000457501 1466 ntBASIC7.6□□□□□ -1.19
USB1Q9BQ65 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
USB1Q9BQ65 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.6□□□□□ -1.19
USB1Q9BQ65 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms