Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 CCAT2-201ENST00000630920 1752 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 ZNF402P-201ENST00000404435 3100 ntBASIC8.06□□□□□ -1.12
SIN3AQ96ST3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
SIN3AQ96ST3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC114774.1-201ENST00000507410 1770 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 RN7SKP124-201ENST00000364730 341 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AL513325.1-201ENST00000417716 1034 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 OR10T1P-201ENST00000424327 947 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 UBE2V2P4-201ENST00000447495 259 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 RPSAP39-201ENST00000467439 883 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC012616.1-201ENST00000600294 197 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AL352984.2-202ENST00000613699 155 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 AL138960.1-201ENST00000613838 513 ntBASIC8.05□□□□□ -1.12
SIN3AQ96ST3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
SIN3AQ96ST3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 OR2AT2P-201ENST00000413438 905 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 RNF10P1-201ENST00000418589 369 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 RN7SL466P-201ENST00000497546 295 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC136777.2-201ENST00000522979 358 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 OR5AM1P-201ENST00000532136 1032 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 DPPA3P2-201ENST00000553589 478 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AL589674.2-201ENST00000604304 337 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC007204.2-201ENST00000615022 616 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AC007683.2-201ENST00000624681 714 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 MT-RNR2-201ENST00000387347 1559 ntBASIC8.04□□□□□ -1.12
SIN3AQ96ST3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
SIN3AQ96ST3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AL391422.1-201ENST00000402155 436 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 GAPDHP42-201ENST00000406848 981 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 RNA5SP178-201ENST00000410380 128 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 UBA52P7-201ENST00000486088 380 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 NRBF2P4-201ENST00000520874 850 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 PMS2P3-207ENST00000529061 717 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC027026.1-201ENST00000532323 742 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 RBM22P12-201ENST00000567098 1255 ntBASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SIN3AQ96ST3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms