Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 RN7SKP240-201ENST00000410583 375 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 RPL32P33-201ENST00000487023 394 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 NENFP3-201ENST00000503735 313 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC021146.10-201ENST00000515628 706 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC021678.3-201ENST00000517893 476 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC092121.1-201ENST00000569452 202 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC090607.5-201ENST00000615692 224 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 AC073869.7-201ENST00000640874 297 ntBASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC65Q8IXS2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC116158.1-201ENST00000560231 2129 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 NEPNP-201ENST00000404786 1371 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AL159987.1-201ENST00000347911 293 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 OR7E101P-201ENST00000400428 513 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 HLA-DPA3-207ENST00000454398 229 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC009120.1-201ENST00000493458 473 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 RNA5SP271-201ENST00000516700 88 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC020937.1-201ENST00000519677 1013 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC084824.2-201ENST00000548906 345 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 NPM1P5-201ENST00000557228 838 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 Z95327.3-201ENST00000610385 572 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 AC022400.9-201ENST00000623633 273 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 PROS2P-201ENST00000474651 1951 ntBASIC6.35□□□□□ -1.39
CCDC65Q8IXS2 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AL512637.1-201ENST00000439523 1231 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 DNAJA1P5-201ENST00000440278 943 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC073072.2-201ENST00000447425 348 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC022215.1-201ENST00000481770 362 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC073610.1-201ENST00000489971 396 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 OR7E157P-201ENST00000494376 911 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 PFN1P8-201ENST00000497012 543 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 SNORA70.11-201ENST00000515987 138 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 SNORA70.13-201ENST00000516116 138 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC139697.1-201ENST00000548429 745 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AGGF1P7-201ENST00000562369 913 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC108865.2-201ENST00000606881 432 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 AC129915.3-201ENST00000634128 948 ntBASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC65Q8IXS2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 331.2 ms