Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42BPAQ5VT25 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.27□□□□□ -1.09
CDC42BPAQ5VT25 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDC42BPAQ5VT25 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC8.27□□□□□ -1.09
CDC42BPAQ5VT25 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 RNU4-2-201ENST00000365668 141 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AL807761.1-201ENST00000417622 171 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 RPS3AP38-201ENST00000435889 763 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AL627230.1-201ENST00000613077 211 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AL591926.8-201ENST00000616876 211 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AP000550.3-201ENST00000637734 379 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC022164.1-201ENST00000568767 2673 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC131971.1-201ENST00000332881 1482 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC136624.1-201ENST00000400791 413 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 DDX39BP1-205ENST00000422507 192 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC104837.2-201ENST00000427236 424 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MORF4L1P4-201ENST00000450245 976 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 AP004607.2-201ENST00000533949 322 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MIR4330-201ENST00000579077 105 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MTCO1P1-201ENST00000624263 1081 ntBASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CDC42BPAQ5VT25 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 RNU1-136P-201ENST00000384181 164 ntBASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 ATP5LP5-201ENST00000483050 299 ntBASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 SCARNA16.4-201ENST00000516956 187 ntBASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 AP005432.2-201ENST00000608162 586 ntBASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 CASC19-281ENST00000642118 1554 ntBASIC8.25□□□□□ -1.09
CDC42BPAQ5VT25 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 RPL26P29-201ENST00000415623 438 ntBASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC134349.2-201ENST00000535136 910 ntBASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 MIR4691-201ENST00000583764 85 ntBASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AC092747.4-201ENST00000620519 1861 ntBASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42BPAQ5VT25 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC058823.1-201ENST00000485315 474 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC093890.1-201ENST00000502554 540 ntBASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC8.23□□□□□ -1.09
CDC42BPAQ5VT25 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms