Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 CASC19-255ENST00000641733 1385 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 PRSS3P4-201ENST00000453323 162 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 AL513327.3-201ENST00000602618 469 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 SELE-204ENST00000367776 3576 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 SELE-205ENST00000367777 3576 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PRKDCP78527 POT1-202ENST00000393329 3950 ntTSL 5 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC016745.2-201ENST00000608834 3443 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PRKDCP78527 RPL23AP1-201ENST00000428990 471 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKDCP78527 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKDCP78527 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.85□□□□□ -1.79
PRKDCP78527 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.85□□□□□ -1.79
PRKDCP78527 RPL12P25-202ENST00000598100 674 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 NANOGP3-201ENST00000605855 286 ntBASIC3.85□□□□□ -1.79
PRKDCP78527 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKDCP78527 OR4K15-201ENST00000305051 1216 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 GSTM5P1-201ENST00000434751 660 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 AL672138.1-201ENST00000450604 1015 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 RSU1P1-201ENST00000453416 441 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.84□□□□□ -1.79
PRKDCP78527 AC020890.1-201ENST00000491837 504 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKDCP78527 AC099676.1-201ENST00000608886 657 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PRKDCP78527 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 AP003119.3-201ENST00000566747 4192 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 LINC01616-201ENST00000561816 2280 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 DIP2C-202ENST00000381496 7749 ntTSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKDCP78527 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PRKDCP78527 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 SNORA70F-201ENST00000384142 135 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 OR6C69P-201ENST00000394268 893 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 HMGB3P7-201ENST00000400214 611 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 IGHV1-14-201ENST00000523391 241 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 AC007494.1-201ENST00000562293 760 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 SNORD91A-202ENST00000609620 191 ntBASIC3.84□□□□□ -1.79
PRKDCP78527 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC3.84□□□□□ -1.79
PRKDCP78527 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PRKDCP78527 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC3.84□□□□□ -1.8
PRKDCP78527 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 MIR670-201ENST00000390142 98 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC3.84□□□□□ -1.8
PRKDCP78527 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.84□□□□□ -1.8
PRKDCP78527 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.84□□□□□ -1.8
PRKDCP78527 AC091390.3-201ENST00000426478 338 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.84□□□□□ -1.8
PRKDCP78527 GAPDHP56-201ENST00000506031 988 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 NDUFB4P12-201ENST00000513465 390 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PRKDCP78527 AP005119.2-201ENST00000579735 1105 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 AL139041.1-201ENST00000605480 610 ntBASIC3.84□□□□□ -1.8
PRKDCP78527 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms