Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 RN7SKP144-201ENST00000411108 279 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 AC004690.1-201ENST00000418216 328 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AC073410.1-201ENST00000435125 589 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 COL11A2P1-205ENST00000441798 676 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 CUBNP2-201ENST00000443534 1139 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.08□□□□□ -1.76
CKS1BP61024 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 AC097463.1-201ENST00000447288 481 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 EIF3LP2-201ENST00000457262 807 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AC011225.1-201ENST00000457751 369 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.08□□□□□ -1.76
CKS1BP61024 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 AC107015.1-201ENST00000466902 747 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.08□□□□□ -1.76
CKS1BP61024 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 CCDC11P1-201ENST00000503137 1162 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.08□□□□□ -1.76
CKS1BP61024 RNA5SP418-201ENST00000515951 117 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CKS1BP61024 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 PDCD5P1-201ENST00000543528 309 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 CHEK2P2-201ENST00000554701 672 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 MIR6726-201ENST00000613751 61 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AC096708.4-201ENST00000620563 552 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AL137067.2-201ENST00000621202 131 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.08□□□□□ -1.76
CKS1BP61024 AC006453.3-201ENST00000635891 377 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 AL133243.3-201ENST00000617415 3004 ntBASIC4.08□□□□□ -1.76
CKS1BP61024 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.08□□□□□ -1.76
CKS1BP61024 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CKS1BP61024 THAP12P9-201ENST00000503971 2360 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 MAPK10-286ENST00000641208 8747 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 RLIMP2-201ENST00000427891 1563 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 RNA5SP308-201ENST00000362532 115 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 RNA5SP375-201ENST00000362975 119 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC019155.1-201ENST00000382242 574 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 SNORA7A-201ENST00000384765 139 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC026310.1-201ENST00000396004 378 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AL359643.1-201ENST00000404109 423 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 RN7SKP166-201ENST00000410812 305 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 E2F6P1-201ENST00000428850 745 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.07□□□□□ -1.76
CKS1BP61024 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 E2F6P3-201ENST00000441743 743 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 GAPDHP23-201ENST00000444823 993 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC073109.1-201ENST00000445066 978 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 RN7SL372P-201ENST00000461982 298 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC098583.1-201ENST00000480875 255 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 Y_RNA.710-201ENST00000516975 110 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 CYCSP25-201ENST00000525280 316 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CKS1BP61024 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CKS1BP61024 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.07□□□□□ -1.76
CKS1BP61024 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC060780.2-201ENST00000589047 198 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 AC010998.3-201ENST00000613871 631 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.07□□□□□ -1.76
CKS1BP61024 MIR6811-201ENST00000620409 58 ntBASIC4.07□□□□□ -1.76
CKS1BP61024 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.07□□□□□ -1.76
CKS1BP61024 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms