Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNA5SP394-201ENST00000364216 119 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 U3.25-201ENST00000391209 220 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AMZ2P2-201ENST00000406819 1057 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 RN7SKP151-201ENST00000410230 316 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 RPS12P17-201ENST00000438591 377 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 TXNP2-201ENST00000443918 295 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 AL353718.1-201ENST00000451028 517 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 RPL17P2-201ENST00000491913 451 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN2P57739 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 AC074029.2-201ENST00000551045 634 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AC022404.1-201ENST00000555320 273 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN2P57739 AC007494.1-201ENST00000562293 760 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AC010547.6-201ENST00000571789 193 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 AL512624.1-201ENST00000613638 469 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.84□□□□□ -1.47
CLDN2P57739 AL731532.1-201ENST00000623972 4236 ntBASIC5.84□□□□□ -1.47
CLDN2P57739 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN2P57739 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN2P57739 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN2P57739 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.84□□□□□ -1.47
CLDN2P57739 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN2P57739 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
CLDN2P57739 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 AC005261.6-201ENST00000623072 1387 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 RNU4-39P-201ENST00000362455 127 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AP003170.5-201ENST00000397185 335 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 RN7SKP166-201ENST00000410812 305 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 SDHDP6-201ENST00000414693 480 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 TRIM60P17-201ENST00000415181 719 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 AC074367.1-201ENST00000438685 1125 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC079922.1-201ENST00000443291 359 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 CYCSP53-201ENST00000455540 265 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 RPS27AP2-201ENST00000457576 465 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC074386.1-201ENST00000476560 767 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 RN7SL214P-201ENST00000487317 265 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 NENFP3-201ENST00000503735 313 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC109481.1-201ENST00000509173 282 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 RNA5SP362-201ENST00000516048 118 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.83□□□□□ -1.48
CLDN2P57739 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 MIR132-201ENST00000591554 101 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 AL139099.4-201ENST00000614802 114 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.83□□□□□ -1.48
CLDN2P57739 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 AC068446.1-201ENST00000556425 1549 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC034229.2-201ENST00000566945 2508 ntBASIC5.83□□□□□ -1.48
CLDN2P57739 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CLDN2P57739 AC068733.2-201ENST00000605434 1418 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CLDN2P57739 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CLDN2P57739 ZNF812P-201ENST00000457674 1694 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CLDN2P57739 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN2P57739 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 MIR365B-201ENST00000362317 111 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 SNORA27.3-201ENST00000364937 134 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 RNA5SP211-201ENST00000365516 117 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLDN2P57739 AC116036.1-201ENST00000412199 367 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 TMA16P2-201ENST00000413187 601 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 RPL34P3-201ENST00000421454 338 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 AL662874.1-201ENST00000426065 230 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 NPM1P26-201ENST00000426339 738 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 HMGB3P24-201ENST00000433260 622 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.82□□□□□ -1.48
CLDN2P57739 EEF1B2P6-201ENST00000445713 673 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 RPS23P6-201ENST00000466136 431 ntBASIC5.82□□□□□ -1.48
CLDN2P57739 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.82□□□□□ -1.48
CLDN2P57739 AC099521.1-201ENST00000482557 334 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 278.6 ms