Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 AC130360.2-201ENST00000533477 1556 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.42□□□□□ -1.22
RIPK4P57078 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RIPK4P57078 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 AC092642.1-201ENST00000392417 425 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC096921.1-201ENST00000411661 375 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC7.42□□□□□ -1.22
RIPK4P57078 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC006335.2-201ENST00000437993 330 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AL450996.1-201ENST00000445574 1202 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AL450023.1-201ENST00000450868 751 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 snoU13.29-201ENST00000459370 104 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 RPSAP39-201ENST00000467439 883 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.42□□□□□ -1.22
RIPK4P57078 AC106872.4-201ENST00000510050 523 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC021146.10-201ENST00000515628 706 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.42□□□□□ -1.22
RIPK4P57078 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.42□□□□□ -1.22
RIPK4P57078 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.42□□□□□ -1.22
RIPK4P57078 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.42□□□□□ -1.22
RIPK4P57078 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.42□□□□□ -1.22
RIPK4P57078 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.42□□□□□ -1.22
RIPK4P57078 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.42□□□□□ -1.22
RIPK4P57078 MIR4302-201ENST00000638058 60 ntBASIC7.42□□□□□ -1.22
RIPK4P57078 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.42□□□□□ -1.22
RIPK4P57078 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.42□□□□□ -1.22
RIPK4P57078 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RIPK4P57078 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.42□□□□□ -1.22
RIPK4P57078 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RIPK4P57078 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
RIPK4P57078 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 GAPDHP24-201ENST00000328713 983 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 MIR323A-201ENST00000362199 86 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RIPK4P57078 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.41□□□□□ -1.22
RIPK4P57078 AL513325.1-201ENST00000417716 1034 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.41□□□□□ -1.22
RIPK4P57078 AL133173.1-201ENST00000423458 397 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 KRT8P51-201ENST00000438938 274 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.41□□□□□ -1.22
RIPK4P57078 PDCL3P4-201ENST00000489621 720 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.41□□□□□ -1.22
RIPK4P57078 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.41□□□□□ -1.22
RIPK4P57078 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.41□□□□□ -1.22
RIPK4P57078 MIR1273E-201ENST00000581165 102 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.41□□□□□ -1.22
RIPK4P57078 AC007683.2-201ENST00000624681 714 ntBASIC7.41□□□□□ -1.22
RIPK4P57078 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RIPK4P57078 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.41□□□□□ -1.22
RIPK4P57078 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 RNA5SP326-201ENST00000363209 110 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 DNAJA1P3-201ENST00000399417 1194 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 TNPO1P1-201ENST00000423641 1138 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 AL390119.1-201ENST00000440329 312 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.4□□□□□ -1.22
RIPK4P57078 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.4□□□□□ -1.22
RIPK4P57078 LDHBP2-201ENST00000456969 1005 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.4□□□□□ -1.22
RIPK4P57078 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.4□□□□□ -1.22
RIPK4P57078 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 AC137627.1-201ENST00000545761 289 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.4□□□□□ -1.22
RIPK4P57078 MRPS21P7-201ENST00000566937 238 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 AL589674.2-201ENST00000604304 337 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 AL691477.1-201ENST00000624398 162 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 AL355480.1-201ENST00000629041 99 ntBASIC7.4□□□□□ -1.22
RIPK4P57078 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RIPK4P57078 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.4□□□□□ -1.22
RIPK4P57078 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms