Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.53□□□□□ -1.36
HMGCS2P54868 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGCS2P54868 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
HMGCS2P54868 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HMGCS2P54868 LINC01963-201ENST00000562038 3148 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HMGCS2P54868 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGCS2P54868 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGCS2P54868 RPL23P2-201ENST00000320371 421 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC005294.1-201ENST00000355509 281 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 U8.4-201ENST00000363626 134 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGCS2P54868 LDHAP2-201ENST00000437325 985 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGCS2P54868 OSTCP1-201ENST00000455507 450 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 CBX1P5-201ENST00000475330 559 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGCS2P54868 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGCS2P54868 AC078878.1-201ENST00000539832 958 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGCS2P54868 AL683813.2-201ENST00000605245 502 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC239803.2-201ENST00000610161 430 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC025574.2-201ENST00000615621 514 ntBASIC6.52□□□□□ -1.37
HMGCS2P54868 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGCS2P54868 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGCS2P54868 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGCS2P54868 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGCS2P54868 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGCS2P54868 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGCS2P54868 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGCS2P54868 U3.2-201ENST00000362981 210 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 MIR585-201ENST00000384887 94 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 RN7SKP213-201ENST00000410746 298 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGCS2P54868 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGCS2P54868 AC005033.1-201ENST00000428904 813 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGCS2P54868 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGCS2P54868 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGCS2P54868 BLZF2P-201ENST00000553776 1130 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AGGF1P7-201ENST00000562369 913 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 MIR3691-201ENST00000578066 90 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AC005224.3-201ENST00000584683 2140 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGCS2P54868 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 AC126915.2-201ENST00000610957 190 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AP002505.2-201ENST00000623585 696 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 AC114876.1-201ENST00000490962 1366 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGCS2P54868 AC022034.1-201ENST00000512867 2156 ntBASIC6.51□□□□□ -1.37
HMGCS2P54868 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGCS2P54868 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGCS2P54868 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 RN7SKP6-201ENST00000364795 319 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HMGCS2P54868 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGCS2P54868 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HMGCS2P54868 MIR765-201ENST00000390226 114 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AL360271.1-201ENST00000395679 510 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 RN7SKP125-201ENST00000410481 302 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGCS2P54868 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGCS2P54868 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AL035090.1-201ENST00000454835 332 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AL445687.2-201ENST00000458156 728 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGCS2P54868 RPL7AP6-201ENST00000477943 801 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.5□□□□□ -1.37
HMGCS2P54868 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.5□□□□□ -1.37
HMGCS2P54868 EIF4A2P5-201ENST00000529914 499 ntBASIC6.5□□□□□ -1.37
HMGCS2P54868 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HMGCS2P54868 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms