Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RNF144AP50876 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF144AP50876 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF144AP50876 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.33□□□□□ -1.24
RNF144AP50876 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF144AP50876 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF144AP50876 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 NBPF25P-201ENST00000606775 2019 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC073342.2-201ENST00000595842 1800 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF144AP50876 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF144AP50876 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 SSX9-201ENST00000376909 591 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
RNF144AP50876 AL080285.1-201ENST00000404225 984 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 HMGB1P11-201ENST00000413899 637 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 BMP2KL-201ENST00000414251 1225 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 PDCL2P1-201ENST00000419302 352 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 FDPSP1-201ENST00000424976 1071 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 ATP5G1P5-201ENST00000429024 411 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 PSMD10P2-201ENST00000432890 672 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 ARMC8P1-201ENST00000443069 1289 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 OR7H1P-201ENST00000448965 922 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 OR52E7P-201ENST00000452394 933 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 AC093166.4-201ENST00000457867 318 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC023598.1-201ENST00000472521 361 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.32□□□□□ -1.24
RNF144AP50876 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC7.32□□□□□ -1.24
RNF144AP50876 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 RNU7-179P-201ENST00000516608 68 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 CDC42P3-201ENST00000518493 633 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 OR6M2P-201ENST00000529831 871 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.32□□□□□ -1.24
RNF144AP50876 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 OR11J5P-201ENST00000556889 934 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC078905.1-201ENST00000560803 509 ntTSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 DNM1P34-202ENST00000567850 315 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 MIR3714-201ENST00000579507 65 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.32□□□□□ -1.24
RNF144AP50876 AP003789.1-201ENST00000617737 605 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF144AP50876 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 CYP1D1P-201ENST00000416662 1433 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 AL023806.3-201ENST00000638502 2704 ntBASIC7.32□□□□□ -1.24
RNF144AP50876 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
RNF144AP50876 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF144AP50876 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF144AP50876 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 AC008555.1-201ENST00000561778 2757 ntBASIC7.31□□□□□ -1.24
RNF144AP50876 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF144AP50876 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF144AP50876 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
RNF144AP50876 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF144AP50876 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF144AP50876 AL035467.1-201ENST00000403583 686 ntBASIC7.31□□□□□ -1.24
RNF144AP50876 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF144AP50876 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RNF144AP50876 JKAMPP1-201ENST00000413804 919 ntBASIC7.31□□□□□ -1.24
RNF144AP50876 AL161631.1-201ENST00000417933 486 ntBASIC7.31□□□□□ -1.24
RNF144AP50876 HMGB3P20-201ENST00000417997 600 ntBASIC7.31□□□□□ -1.24
RNF144AP50876 AC068137.1-201ENST00000429272 584 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms