Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.61□□□□□ -1.51
CENPAP49450 ZNF965P-201ENST00000432501 817 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.61□□□□□ -1.51
CENPAP49450 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 AL034369.1-201ENST00000453808 477 ntBASIC5.61□□□□□ -1.51
CENPAP49450 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CENPAP49450 CABYRP1-201ENST00000465493 1045 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AC092902.1-201ENST00000486999 259 ntBASIC5.61□□□□□ -1.51
CENPAP49450 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 AC093763.2-201ENST00000505334 1223 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AC067904.2-201ENST00000517322 1283 ntBASIC5.61□□□□□ -1.51
CENPAP49450 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.61□□□□□ -1.51
CENPAP49450 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.61□□□□□ -1.51
CENPAP49450 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.61□□□□□ -1.51
CENPAP49450 AC131935.1-201ENST00000524621 333 ntBASIC5.61□□□□□ -1.51
CENPAP49450 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CENPAP49450 AC113192.3-201ENST00000529152 742 ntBASIC5.61□□□□□ -1.51
CENPAP49450 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
CENPAP49450 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.61□□□□□ -1.51
CENPAP49450 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CENPAP49450 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CENPAP49450 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 MIR3189-201ENST00000578735 73 ntBASIC5.61□□□□□ -1.51
CENPAP49450 QTRT1P1-201ENST00000604344 1078 ntBASIC5.61□□□□□ -1.51
CENPAP49450 BNIP3P31-201ENST00000604515 566 ntBASIC5.61□□□□□ -1.51
CENPAP49450 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 AC110792.4-201ENST00000609843 298 ntBASIC5.61□□□□□ -1.51
CENPAP49450 CR589904.2-201ENST00000612533 440 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.61□□□□□ -1.51
CENPAP49450 AC022306.3-201ENST00000619930 550 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AP001005.3-201ENST00000622049 129 ntBASIC5.61□□□□□ -1.51
CENPAP49450 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.61□□□□□ -1.51
CENPAP49450 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CENPAP49450 OR7E91P-202ENST00000642062 1198 ntBASIC5.61□□□□□ -1.51
CENPAP49450 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.61□□□□□ -1.51
CENPAP49450 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CENPAP49450 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CENPAP49450 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CENPAP49450 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 AP001541.1-201ENST00000623322 1904 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 SNORD1C-201ENST00000363315 78 ntBASIC5.6□□□□□ -1.51
CENPAP49450 RNA5SP485-201ENST00000365053 119 ntBASIC5.6□□□□□ -1.51
CENPAP49450 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 AL033519.1-201ENST00000407266 307 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.6□□□□□ -1.51
CENPAP49450 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.6□□□□□ -1.51
CENPAP49450 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.6□□□□□ -1.51
CENPAP49450 GTF2IP14-201ENST00000441415 586 ntBASIC5.6□□□□□ -1.51
CENPAP49450 Z99127.2-201ENST00000441426 334 ntBASIC5.6□□□□□ -1.51
CENPAP49450 HMGN1P32-201ENST00000441744 256 ntBASIC5.6□□□□□ -1.51
CENPAP49450 XKRY2-201ENST00000442362 1093 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AC006326.1-201ENST00000445465 787 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AL589765.3-201ENST00000446084 462 ntBASIC5.6□□□□□ -1.51
CENPAP49450 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 RN7SL790P-201ENST00000474043 298 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.6□□□□□ -1.51
CENPAP49450 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.6□□□□□ -1.51
CENPAP49450 RPS27AP18-201ENST00000515536 459 ntBASIC5.6□□□□□ -1.51
CENPAP49450 RNA5SP418-201ENST00000515951 117 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.6□□□□□ -1.51
CENPAP49450 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.6□□□□□ -1.51
CENPAP49450 AP003102.1-201ENST00000525638 661 ntBASIC5.6□□□□□ -1.51
CENPAP49450 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 OSBPL9P3-201ENST00000534523 595 ntBASIC5.6□□□□□ -1.51
CENPAP49450 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CENPAP49450 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 NPIPB1P-202ENST00000588786 828 ntBASIC5.6□□□□□ -1.51
CENPAP49450 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 DYNLL1P1-201ENST00000595442 269 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AC022919.1-201ENST00000624979 626 ntBASIC5.6□□□□□ -1.51
CENPAP49450 AC068213.1-201ENST00000625124 226 ntBASIC5.6□□□□□ -1.51
CENPAP49450 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CENPAP49450 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CENPAP49450 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CENPAP49450 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.6□□□□□ -1.51
CENPAP49450 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CENPAP49450 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.59□□□□□ -1.51
CENPAP49450 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms