Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 AL080312.1-201ENST00000256654 824 ntBASIC5.42□□□□□ -1.54
SOX2P48431 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 AL391422.1-201ENST00000402155 436 ntBASIC5.42□□□□□ -1.54
SOX2P48431 GTF2IP5-201ENST00000414608 731 ntBASIC5.42□□□□□ -1.54
SOX2P48431 BMS1P13-201ENST00000417301 885 ntBASIC5.42□□□□□ -1.54
SOX2P48431 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 CDC42P6-201ENST00000421246 576 ntBASIC5.42□□□□□ -1.54
SOX2P48431 PTPN2P1-201ENST00000423212 1072 ntBASIC5.42□□□□□ -1.54
SOX2P48431 CLCN3P1-201ENST00000423965 1017 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 AL589794.1-201ENST00000424971 390 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AL354707.3-201ENST00000427308 331 ntBASIC5.42□□□□□ -1.54
SOX2P48431 CETN4P-201ENST00000432407 469 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX2P48431 AL731534.1-201ENST00000434711 269 ntBASIC5.42□□□□□ -1.54
SOX2P48431 FABP5P3-201ENST00000437960 408 ntBASIC5.42□□□□□ -1.54
SOX2P48431 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 BMS1P11-201ENST00000442351 885 ntBASIC5.42□□□□□ -1.54
SOX2P48431 EXOSC3P1-201ENST00000448649 500 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 BMS1P9-201ENST00000457640 885 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC092691.2-201ENST00000461787 803 ntBASIC5.42□□□□□ -1.54
SOX2P48431 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 RPL21P47-201ENST00000483696 477 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC116562.1-201ENST00000485355 781 ntBASIC5.42□□□□□ -1.54
SOX2P48431 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX2P48431 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC008429.4-201ENST00000521201 182 ntBASIC5.42□□□□□ -1.54
SOX2P48431 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 OR8K4P-201ENST00000534608 872 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX2P48431 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 AC104229.1-201ENST00000561364 255 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC010735.1-201ENST00000567305 1026 ntBASIC5.42□□□□□ -1.54
SOX2P48431 SYPL1P2-201ENST00000582878 727 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX2P48431 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 AP001160.4-201ENST00000596971 382 ntBASIC5.42□□□□□ -1.54
SOX2P48431 RPL12P48-201ENST00000605620 304 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AP002802.2-201ENST00000605877 235 ntBASIC5.42□□□□□ -1.54
SOX2P48431 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 AC009464.1-201ENST00000615731 469 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC009159.2-201ENST00000617603 606 ntBASIC5.42□□□□□ -1.54
SOX2P48431 MIR6829-201ENST00000620375 67 ntBASIC5.42□□□□□ -1.54
SOX2P48431 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 AC006453.3-201ENST00000635891 377 ntBASIC5.42□□□□□ -1.54
SOX2P48431 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 NAMPTP1-201ENST00000440465 2514 ntBASIC5.42□□□□□ -1.54
SOX2P48431 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 AC007382.1-201ENST00000624376 2618 ntBASIC5.42□□□□□ -1.54
SOX2P48431 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 AL442128.2-201ENST00000620246 1824 ntBASIC5.41□□□□□ -1.54
SOX2P48431 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX2P48431 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 AC003985.2-201ENST00000562268 1669 ntBASIC5.41□□□□□ -1.54
SOX2P48431 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.41□□□□□ -1.54
SOX2P48431 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX2P48431 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 RNA5SP308-201ENST00000362532 115 ntBASIC5.41□□□□□ -1.54
SOX2P48431 RNU1-84P-201ENST00000365447 164 ntBASIC5.41□□□□□ -1.54
SOX2P48431 SNORA7A-201ENST00000384765 139 ntBASIC5.41□□□□□ -1.54
SOX2P48431 RNU6-796P-201ENST00000391086 107 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AC019178.1-201ENST00000392337 440 ntBASIC5.41□□□□□ -1.54
SOX2P48431 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX2P48431 RN7SKP117-201ENST00000410175 264 ntBASIC5.41□□□□□ -1.54
SOX2P48431 RN7SKP221-201ENST00000410420 301 ntBASIC5.41□□□□□ -1.54
SOX2P48431 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX2P48431 AL161742.1-201ENST00000418154 584 ntBASIC5.41□□□□□ -1.54
SOX2P48431 NENFP1-201ENST00000419476 466 ntBASIC5.41□□□□□ -1.54
SOX2P48431 IGLV3-4-201ENST00000432300 244 ntBASIC5.41□□□□□ -1.54
SOX2P48431 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX2P48431 GTF2IP14-201ENST00000441415 586 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms