Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 SNRPEP2-201ENST00000397592 279 ntBASIC7.82□□□□□ -1.16
VARSP26640 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 ACTR3P2-201ENST00000439585 1257 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 AL353754.1-201ENST00000440219 340 ntBASIC7.82□□□□□ -1.16
VARSP26640 SNX18P9-201ENST00000440580 835 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC023512.1-201ENST00000444513 499 ntBASIC7.82□□□□□ -1.16
VARSP26640 FABP3P2-201ENST00000453169 399 ntBASIC7.82□□□□□ -1.16
VARSP26640 AL121877.1-201ENST00000453704 622 ntBASIC7.82□□□□□ -1.16
VARSP26640 RN7SL587P-201ENST00000459853 281 ntBASIC7.82□□□□□ -1.16
VARSP26640 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.82□□□□□ -1.16
VARSP26640 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 AC106822.1-201ENST00000502647 526 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC010486.1-201ENST00000511793 424 ntBASIC7.82□□□□□ -1.16
VARSP26640 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.82□□□□□ -1.16
VARSP26640 HSPA8P13-201ENST00000523715 472 ntBASIC7.82□□□□□ -1.16
VARSP26640 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 NXPE2P1-201ENST00000543705 726 ntBASIC7.82□□□□□ -1.16
VARSP26640 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 HIF1AP1-201ENST00000553642 175 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC005230.1-201ENST00000555418 285 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.82□□□□□ -1.16
VARSP26640 AC026470.2-201ENST00000561492 181 ntBASIC7.82□□□□□ -1.16
VARSP26640 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 AC006116.10-201ENST00000591836 581 ntBASIC7.82□□□□□ -1.16
VARSP26640 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 AC006006.1-201ENST00000603082 144 ntBASIC7.82□□□□□ -1.16
VARSP26640 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 TSHZ2-205ENST00000626626 670 ntBASIC7.82□□□□□ -1.16
VARSP26640 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
VARSP26640 MTND5P3-201ENST00000438536 1800 ntBASIC7.82□□□□□ -1.16
VARSP26640 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
VARSP26640 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.82□□□□□ -1.16
VARSP26640 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.82□□□□□ -1.16
VARSP26640 PSG5-201ENST00000342951 1626 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 ATP5BP1-201ENST00000411980 1574 ntBASIC7.81□□□□□ -1.16
VARSP26640 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.81□□□□□ -1.16
VARSP26640 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.81□□□□□ -1.16
VARSP26640 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 AC027279.1-201ENST00000568885 4284 ntBASIC7.81□□□□□ -1.16
VARSP26640 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
VARSP26640 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
VARSP26640 RNA5SP263-201ENST00000363376 128 ntBASIC7.81□□□□□ -1.16
VARSP26640 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.81□□□□□ -1.16
VARSP26640 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 RPL5P5-201ENST00000392009 893 ntBASIC7.81□□□□□ -1.16
VARSP26640 IL6-206ENST00000407492 926 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 RN7SKP58-201ENST00000411010 305 ntBASIC7.81□□□□□ -1.16
VARSP26640 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 Z68868.1-201ENST00000429048 544 ntBASIC7.81□□□□□ -1.16
VARSP26640 VDAC1P6-201ENST00000430062 855 ntBASIC7.81□□□□□ -1.16
VARSP26640 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC7.81□□□□□ -1.16
VARSP26640 BRK1P2-201ENST00000442875 223 ntBASIC7.81□□□□□ -1.16
VARSP26640 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.81□□□□□ -1.16
VARSP26640 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC7.81□□□□□ -1.16
VARSP26640 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.81□□□□□ -1.16
VARSP26640 AL031073.1-201ENST00000503029 1139 ntBASIC7.81□□□□□ -1.16
VARSP26640 NIFKP7-201ENST00000503365 834 ntBASIC7.81□□□□□ -1.16
VARSP26640 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC7.81□□□□□ -1.16
VARSP26640 AC068134.3-201ENST00000513620 788 ntBASIC7.81□□□□□ -1.16
VARSP26640 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC7.81□□□□□ -1.16
VARSP26640 AC091982.1-201ENST00000518134 520 ntBASIC7.81□□□□□ -1.16
VARSP26640 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms