Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.71□□□□□ -1.33
POLR2AP24928 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.71□□□□□ -1.33
POLR2AP24928 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
POLR2AP24928 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
POLR2AP24928 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
POLR2AP24928 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
POLR2AP24928 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
POLR2AP24928 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
POLR2AP24928 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.71□□□□□ -1.34
POLR2AP24928 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
POLR2AP24928 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
POLR2AP24928 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 RNA5SP87-201ENST00000384155 118 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 U3.36-201ENST00000408418 213 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 RPL26P29-201ENST00000415623 438 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 NENFP1-201ENST00000419476 466 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 AL354692.1-201ENST00000423044 315 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.71□□□□□ -1.34
POLR2AP24928 AC093801.2-201ENST00000503966 1050 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.71□□□□□ -1.34
POLR2AP24928 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.71□□□□□ -1.34
POLR2AP24928 AL022394.1-201ENST00000606979 292 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 MIR7703-201ENST00000620784 77 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 ZNF658B-201ENST00000602828 3408 ntBASIC6.71□□□□□ -1.34
POLR2AP24928 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.71□□□□□ -1.34
POLR2AP24928 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.71□□□□□ -1.34
POLR2AP24928 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
POLR2AP24928 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.71□□□□□ -1.34
POLR2AP24928 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 RNU1-43P-201ENST00000365052 165 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 MIR765-201ENST00000390226 114 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 AL355143.1-201ENST00000407101 841 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 FAR2P2-201ENST00000413041 594 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC106901.1-201ENST00000425086 698 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 FAR2P4-202ENST00000425399 584 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 UBE2V2P1-201ENST00000434717 398 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 GSTA7P-201ENST00000438425 448 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.7□□□□□ -1.34
POLR2AP24928 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 RPS3AP41-201ENST00000462701 778 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC079841.1-201ENST00000481228 950 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 RPL38P3-201ENST00000484463 213 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AC108729.1-201ENST00000487812 947 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AC119751.4-201ENST00000507498 357 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 CYP4F27P-201ENST00000514557 494 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC105036.1-201ENST00000566222 271 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.7□□□□□ -1.34
POLR2AP24928 AL391834.2-201ENST00000609982 546 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.7□□□□□ -1.34
POLR2AP24928 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 USP9YP3-201ENST00000434481 1766 ntBASIC6.7□□□□□ -1.34
POLR2AP24928 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
POLR2AP24928 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
POLR2AP24928 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
POLR2AP24928 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
POLR2AP24928 RPS3AP25-201ENST00000411660 793 ntBASIC6.69□□□□□ -1.34
POLR2AP24928 AC007161.1-204ENST00000423039 460 ntBASIC6.69□□□□□ -1.34
POLR2AP24928 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.69□□□□□ -1.34
POLR2AP24928 AL162739.1-201ENST00000450606 307 ntBASIC6.69□□□□□ -1.34
POLR2AP24928 CYCSP53-201ENST00000455540 265 ntBASIC6.69□□□□□ -1.34
POLR2AP24928 AGGF1P3-201ENST00000493675 1213 ntBASIC6.69□□□□□ -1.34
POLR2AP24928 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.69□□□□□ -1.34
POLR2AP24928 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.69□□□□□ -1.34
POLR2AP24928 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms