Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC093763.2-201ENST00000505334 1223 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGA1P17096 RN7SKP253-201ENST00000516424 309 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.81□□□□□ -1.48
HMGA1P17096 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.81□□□□□ -1.48
HMGA1P17096 AC137627.1-201ENST00000545761 289 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 BLZF2P-201ENST00000553776 1130 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGA1P17096 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGA1P17096 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.81□□□□□ -1.48
HMGA1P17096 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
HMGA1P17096 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC008115.4-201ENST00000619780 775 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 AC021766.1-201ENST00000624404 741 ntBASIC5.81□□□□□ -1.48
HMGA1P17096 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HMGA1P17096 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.81□□□□□ -1.48
HMGA1P17096 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 AC005225.5-201ENST00000623547 2225 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
HMGA1P17096 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGA1P17096 SNORA16A-201ENST00000384342 137 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HMGA1P17096 SPTLC1P2-201ENST00000407089 121 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 RPS26P38-201ENST00000414476 348 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 NANOGP9-201ENST00000439890 892 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 CNOT7P2-201ENST00000441051 832 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGA1P17096 RN7SL30P-201ENST00000488416 306 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC006499.3-201ENST00000506077 748 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC018558.5-201ENST00000565840 952 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 PRELID3BP3-201ENST00000584963 545 ntBASIC5.8□□□□□ -1.48
HMGA1P17096 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HMGA1P17096 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
HMGA1P17096 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HMGA1P17096 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGA1P17096 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HMGA1P17096 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMGA1P17096 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 RNU4-34P-201ENST00000410431 124 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGA1P17096 SLC35E1P1-201ENST00000419313 864 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.79□□□□□ -1.48
HMGA1P17096 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGA1P17096 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGA1P17096 RPS21P4-201ENST00000487122 248 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HMGA1P17096 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 RPEP1-201ENST00000504507 658 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.79□□□□□ -1.48
HMGA1P17096 RN7SKP99-201ENST00000517028 307 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.79□□□□□ -1.48
HMGA1P17096 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGA1P17096 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.79□□□□□ -1.48
HMGA1P17096 SAMMSON-209ENST00000641222 1100 ntBASIC5.79□□□□□ -1.48
HMGA1P17096 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HMGA1P17096 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms