Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 THAP12P4-201ENST00000528321 2266 ntBASIC9.39□□□□□ -0.91
CFTRP13569 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 RNA5SP326-201ENST00000363209 110 ntBASIC9.39□□□□□ -0.91
CFTRP13569 EI24P4-201ENST00000423683 1078 ntBASIC9.39□□□□□ -0.91
CFTRP13569 MGAT2P2-201ENST00000427194 797 ntBASIC9.39□□□□□ -0.91
CFTRP13569 AC097484.1-201ENST00000471148 389 ntBASIC9.39□□□□□ -0.91
CFTRP13569 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.39□□□□□ -0.91
CFTRP13569 EIF3KP3-201ENST00000514461 639 ntBASIC9.39□□□□□ -0.91
CFTRP13569 RN7SKP253-201ENST00000516424 309 ntBASIC9.39□□□□□ -0.91
CFTRP13569 IGHVII-44-2-201ENST00000517728 250 ntBASIC9.39□□□□□ -0.91
CFTRP13569 PMS2P3-207ENST00000529061 717 ntBASIC9.39□□□□□ -0.91
CFTRP13569 AL513327.3-201ENST00000602618 469 ntBASIC9.39□□□□□ -0.91
CFTRP13569 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.39□□□□□ -0.91
CFTRP13569 AC073869.10-201ENST00000642016 354 ntBASIC9.39□□□□□ -0.91
CFTRP13569 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.39□□□□□ -0.91
CFTRP13569 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
CFTRP13569 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CFTRP13569 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.38□□□□□ -0.91
CFTRP13569 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC9.38□□□□□ -0.91
CFTRP13569 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 NLRP3P1-201ENST00000622303 1785 ntBASIC9.38□□□□□ -0.91
CFTRP13569 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
CFTRP13569 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 AL009179.1-201ENST00000406085 265 ntBASIC9.38□□□□□ -0.91
CFTRP13569 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC9.38□□□□□ -0.91
CFTRP13569 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC9.38□□□□□ -0.91
CFTRP13569 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.38□□□□□ -0.91
CFTRP13569 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.38□□□□□ -0.91
CFTRP13569 SCARNA16.4-201ENST00000516956 187 ntBASIC9.38□□□□□ -0.91
CFTRP13569 AC078899.1-201ENST00000521432 1185 ntBASIC9.38□□□□□ -0.91
CFTRP13569 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.38□□□□□ -0.91
CFTRP13569 AL512310.9-201ENST00000553311 948 ntBASIC9.38□□□□□ -0.91
CFTRP13569 MIR4691-201ENST00000583764 85 ntBASIC9.38□□□□□ -0.91
CFTRP13569 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CFTRP13569 AC073575.2-201ENST00000614212 627 ntBASIC9.38□□□□□ -0.91
CFTRP13569 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFTRP13569 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CFTRP13569 AP000866.6-201ENST00000638898 3579 ntBASIC9.37□□□□□ -0.91
CFTRP13569 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.37□□□□□ -0.91
CFTRP13569 DOCK11P1-201ENST00000553480 5932 ntBASIC9.37□□□□□ -0.91
CFTRP13569 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
CFTRP13569 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.37□□□□□ -0.91
CFTRP13569 AC019050.1-201ENST00000418508 492 ntBASIC9.37□□□□□ -0.91
CFTRP13569 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.37□□□□□ -0.91
CFTRP13569 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC9.37□□□□□ -0.91
CFTRP13569 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.37□□□□□ -0.91
CFTRP13569 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.37□□□□□ -0.91
CFTRP13569 RAB9BP1-201ENST00000519581 626 ntBASIC9.37□□□□□ -0.91
CFTRP13569 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.37□□□□□ -0.91
CFTRP13569 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.37□□□□□ -0.91
CFTRP13569 CASC19-221ENST00000641309 1382 ntBASIC9.37□□□□□ -0.91
CFTRP13569 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 AC112243.1-201ENST00000623949 3851 ntBASIC9.37□□□□□ -0.91
CFTRP13569 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC9.37□□□□□ -0.91
CFTRP13569 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
CFTRP13569 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CFTRP13569 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.36□□□□□ -0.91
CFTRP13569 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 RNU6-398P-201ENST00000384143 109 ntBASIC9.36□□□□□ -0.91
CFTRP13569 DBIP1-201ENST00000401435 260 ntBASIC9.36□□□□□ -0.91
CFTRP13569 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC9.36□□□□□ -0.91
CFTRP13569 CT45A11P-201ENST00000448043 1134 ntBASIC9.36□□□□□ -0.91
CFTRP13569 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.36□□□□□ -0.91
CFTRP13569 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.36□□□□□ -0.91
CFTRP13569 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC9.36□□□□□ -0.91
CFTRP13569 AC005000.1-201ENST00000536192 288 ntBASIC9.36□□□□□ -0.91
CFTRP13569 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.36□□□□□ -0.91
CFTRP13569 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.36□□□□□ -0.91
CFTRP13569 RPL27-207ENST00000590864 569 ntTSL 2 BASIC9.36□□□□□ -0.91
CFTRP13569 AC083809.1-201ENST00000615051 472 ntBASIC9.36□□□□□ -0.91
CFTRP13569 AC092821.2-201ENST00000545710 2042 ntBASIC9.36□□□□□ -0.91
CFTRP13569 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.36□□□□□ -0.91
CFTRP13569 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFTRP13569 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms