Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RPL12P18-201ENST00000437175 325 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AL031663.1-201ENST00000437445 219 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.47□□□□□ -1.21
HMGB1P09429 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC7.47□□□□□ -1.21
HMGB1P09429 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.47□□□□□ -1.21
HMGB1P09429 EIF4A1P11-201ENST00000451239 222 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 RN7SL221P-201ENST00000466190 281 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 RN7SL369P-201ENST00000477138 299 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 RN7SL326P-201ENST00000477493 296 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
HMGB1P09429 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.47□□□□□ -1.21
HMGB1P09429 SNORA31.13-201ENST00000516624 135 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 RNA5SP400-201ENST00000517155 111 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AC113191.1-201ENST00000517759 403 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 CYCSP25-201ENST00000525280 316 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AC135983.3-201ENST00000528049 1226 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.47□□□□□ -1.21
HMGB1P09429 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC7.47□□□□□ -1.21
HMGB1P09429 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.47□□□□□ -1.21
HMGB1P09429 HMGN1P26-201ENST00000558737 303 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 MIR3189-201ENST00000578735 73 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.47□□□□□ -1.21
HMGB1P09429 AC006924.1-201ENST00000610750 559 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HMGB1P09429 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HMGB1P09429 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HMGB1P09429 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
HMGB1P09429 SHQ1P1-201ENST00000437111 1544 ntBASIC7.47□□□□□ -1.21
HMGB1P09429 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HMGB1P09429 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HMGB1P09429 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.46□□□□□ -1.21
HMGB1P09429 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.21
HMGB1P09429 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HMGB1P09429 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HMGB1P09429 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HMGB1P09429 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 RNU2-17P-201ENST00000410290 190 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGB1P09429 XKRYP4-201ENST00000414395 483 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGB1P09429 YWHAZP2-201ENST00000440317 728 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 OR2L9P-201ENST00000444456 913 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 XKRYP5-201ENST00000449659 483 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 RN7SL515P-201ENST00000463999 297 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.46□□□□□ -1.22
HMGB1P09429 RPL12P31-201ENST00000478433 450 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.46□□□□□ -1.22
HMGB1P09429 RPA2P3-201ENST00000533268 770 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 OR4H6P-201ENST00000563771 921 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 AL021368.3-201ENST00000607119 578 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.46□□□□□ -1.22
HMGB1P09429 AC005899.6-201ENST00000620729 297 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 AC116667.2-201ENST00000641075 823 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 OR7E91P-202ENST00000642062 1198 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGB1P09429 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.46□□□□□ -1.22
HMGB1P09429 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.46□□□□□ -1.22
HMGB1P09429 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 AC010329.2-201ENST00000595195 2737 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGB1P09429 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.46□□□□□ -1.22
HMGB1P09429 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
HMGB1P09429 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.46□□□□□ -1.22
HMGB1P09429 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
HMGB1P09429 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.45□□□□□ -1.22
HMGB1P09429 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 AOX3P-204ENST00000491025 2107 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AL359715.3-201ENST00000569267 2123 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 HMGB1P10-201ENST00000395823 563 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 HMGB1P13-201ENST00000406019 642 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 RN7SKP108-201ENST00000411367 328 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AC013404.1-201ENST00000413068 249 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 DHFRP2-201ENST00000414224 547 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 AL353597.2-202ENST00000434901 373 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
HMGB1P09429 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 POU5F1P5-201ENST00000445059 658 ntBASIC7.45□□□□□ -1.22
HMGB1P09429 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms