Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC103703.1-201ENST00000634783 663 ntBASIC6.35□□□□□ -1.39
TPM3P06753 SAMMSON-227ENST00000642114 1199 ntBASIC6.35□□□□□ -1.39
TPM3P06753 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM3P06753 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM3P06753 MFSD8-219ENST00000641228 2559 ntBASIC6.35□□□□□ -1.39
TPM3P06753 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM3P06753 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
TPM3P06753 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.35□□□□□ -1.39
TPM3P06753 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM3P06753 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM3P06753 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TPM3P06753 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TPM3P06753 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TPM3P06753 SNORA48.4-201ENST00000391089 134 ntBASIC6.34□□□□□ -1.39
TPM3P06753 AC016739.1-201ENST00000405359 345 ntBASIC6.34□□□□□ -1.39
TPM3P06753 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM3P06753 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 PSMD8P1-201ENST00000436275 769 ntBASIC6.34□□□□□ -1.39
TPM3P06753 RPS4XP17-201ENST00000479057 754 ntBASIC6.34□□□□□ -1.39
TPM3P06753 ATP5LP5-201ENST00000483050 299 ntBASIC6.34□□□□□ -1.39
TPM3P06753 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.34□□□□□ -1.39
TPM3P06753 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.34□□□□□ -1.39
TPM3P06753 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.34□□□□□ -1.39
TPM3P06753 SLC25A51P2-201ENST00000535708 889 ntBASIC6.34□□□□□ -1.39
TPM3P06753 AC122688.1-201ENST00000541494 223 ntBASIC6.34□□□□□ -1.39
TPM3P06753 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.34□□□□□ -1.39
TPM3P06753 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 SMIM12P1-201ENST00000603004 274 ntBASIC6.34□□□□□ -1.39
TPM3P06753 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 AL080312.2-201ENST00000613001 630 ntBASIC6.34□□□□□ -1.39
TPM3P06753 AC211486.4-201ENST00000621495 113 ntBASIC6.34□□□□□ -1.39
TPM3P06753 AC091932.2-201ENST00000623014 291 ntBASIC6.34□□□□□ -1.39
TPM3P06753 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TPM3P06753 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.34□□□□□ -1.39
TPM3P06753 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
TPM3P06753 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 AC073465.2-201ENST00000440938 498 ntBASIC6.33□□□□□ -1.4
TPM3P06753 EIF5AP4-201ENST00000441206 465 ntBASIC6.33□□□□□ -1.4
TPM3P06753 AC012512.1-201ENST00000446594 718 ntBASIC6.33□□□□□ -1.4
TPM3P06753 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.33□□□□□ -1.4
TPM3P06753 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 AC016559.2-201ENST00000510759 359 ntBASIC6.33□□□□□ -1.4
TPM3P06753 AC108103.1-201ENST00000511286 446 ntBASIC6.33□□□□□ -1.4
TPM3P06753 ZNF519P4-201ENST00000514008 125 ntBASIC6.33□□□□□ -1.4
TPM3P06753 RNU6-513P-201ENST00000516104 104 ntBASIC6.33□□□□□ -1.4
TPM3P06753 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.33□□□□□ -1.4
TPM3P06753 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.33□□□□□ -1.4
TPM3P06753 AC139697.1-201ENST00000548429 745 ntBASIC6.33□□□□□ -1.4
TPM3P06753 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
TPM3P06753 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 RN7SL290P-201ENST00000578661 300 ntBASIC6.33□□□□□ -1.4
TPM3P06753 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.33□□□□□ -1.4
TPM3P06753 AC073389.3-201ENST00000609434 935 ntBASIC6.33□□□□□ -1.4
TPM3P06753 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms