Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.14□□□□□ -1.59
APOC1P02654 ZNF322P1-201ENST00000568013 1209 ntBASIC5.14□□□□□ -1.59
APOC1P02654 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
APOC1P02654 AC073333.2-201ENST00000603589 769 ntBASIC5.14□□□□□ -1.59
APOC1P02654 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.14□□□□□ -1.59
APOC1P02654 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.14□□□□□ -1.59
APOC1P02654 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.14□□□□□ -1.59
APOC1P02654 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.14□□□□□ -1.59
APOC1P02654 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.14□□□□□ -1.59
APOC1P02654 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.14□□□□□ -1.59
APOC1P02654 CASC19-274ENST00000642018 970 ntBASIC5.14□□□□□ -1.59
APOC1P02654 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOC1P02654 AC117409.1-201ENST00000470499 1310 ntBASIC5.14□□□□□ -1.59
APOC1P02654 AP001029.2-203ENST00000589795 4910 ntBASIC5.14□□□□□ -1.59
APOC1P02654 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
APOC1P02654 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
APOC1P02654 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
APOC1P02654 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
APOC1P02654 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
APOC1P02654 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.13□□□□□ -1.59
APOC1P02654 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 AC121334.1-201ENST00000396414 802 ntBASIC5.13□□□□□ -1.59
APOC1P02654 RN7SKP86-201ENST00000410454 332 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 DEFA9P-201ENST00000433042 285 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 AL353662.1-201ENST00000439099 327 ntBASIC5.13□□□□□ -1.59
APOC1P02654 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 AC005077.1-201ENST00000449226 375 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.13□□□□□ -1.59
APOC1P02654 AC098818.1-201ENST00000478593 252 ntBASIC5.13□□□□□ -1.59
APOC1P02654 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 AC044810.1-201ENST00000480271 711 ntBASIC5.13□□□□□ -1.59
APOC1P02654 RPL38P3-201ENST00000484463 213 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.13□□□□□ -1.59
APOC1P02654 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 GUSBP9-201ENST00000510138 584 ntBASIC5.13□□□□□ -1.59
APOC1P02654 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.13□□□□□ -1.59
APOC1P02654 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 AC005244.1-201ENST00000582566 339 ntBASIC5.13□□□□□ -1.59
APOC1P02654 AC090236.2-201ENST00000587933 1101 ntBASIC5.13□□□□□ -1.59
APOC1P02654 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.13□□□□□ -1.59
APOC1P02654 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 AL449283.1-201ENST00000602631 3403 ntBASIC5.13□□□□□ -1.59
APOC1P02654 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
APOC1P02654 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 ICE2P1-201ENST00000512800 1849 ntBASIC5.13□□□□□ -1.59
APOC1P02654 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.13□□□□□ -1.59
APOC1P02654 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 AC004076.2-201ENST00000620532 3323 ntBASIC5.13□□□□□ -1.59
APOC1P02654 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
APOC1P02654 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
APOC1P02654 AC021242.1-201ENST00000507315 2035 ntBASIC5.13□□□□□ -1.59
APOC1P02654 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
APOC1P02654 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
APOC1P02654 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
APOC1P02654 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
APOC1P02654 SELENOWP1-201ENST00000322792 252 ntBASIC5.12□□□□□ -1.59
APOC1P02654 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
APOC1P02654 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
APOC1P02654 KIF4CP-201ENST00000422742 1279 ntBASIC5.12□□□□□ -1.59
APOC1P02654 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.12□□□□□ -1.59
APOC1P02654 MTND2P40-201ENST00000436718 841 ntBASIC5.12□□□□□ -1.59
APOC1P02654 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.12□□□□□ -1.59
APOC1P02654 EIF5AP4-201ENST00000441206 465 ntBASIC5.12□□□□□ -1.59
APOC1P02654 AC015983.1-201ENST00000441577 373 ntBASIC5.12□□□□□ -1.59
APOC1P02654 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
APOC1P02654 RBMY2AP-201ENST00000445405 1157 ntBASIC5.12□□□□□ -1.59
APOC1P02654 RBMY2CP-201ENST00000448575 1157 ntBASIC5.12□□□□□ -1.59
APOC1P02654 AC093166.3-201ENST00000448785 303 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms