Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC137627.1-201ENST00000545761 289 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC006349.1-201ENST00000555526 235 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC040958.1-201ENST00000561102 201 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC093591.2-201ENST00000565254 3843 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC006272.2-201ENST00000594725 163 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC015849.6-201ENST00000605454 474 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC073488.3-201ENST00000631611 778 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC217777.1-201ENST00000570034 1471 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 AC093849.1-201ENST00000563631 2209 ntBASIC4.29□□□□□ -1.72
HLA-DQA1P01909 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DQA1P01909 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC068870.3-201ENST00000625077 2536 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP004607.3-201ENST00000530354 3915 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RN7SKP184-201ENST00000362348 333 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RN7SKP97-201ENST00000410966 333 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 COX5BP7-201ENST00000414780 274 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 PCNPP4-201ENST00000414817 517 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RANP7-201ENST00000418085 644 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 OR3D1P-201ENST00000438288 955 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC073465.2-201ENST00000440938 498 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 COL11A2P1-205ENST00000441798 676 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 GTF3AP5-201ENST00000442645 697 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AL356121.1-201ENST00000442911 156 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 POU5F1P5-201ENST00000445059 658 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC016027.4-201ENST00000450866 277 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC245028.2-201ENST00000458673 253 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RN7SL393P-201ENST00000463588 296 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP003385.3-201ENST00000472498 287 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP000797.2-201ENST00000475768 606 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RPS7P6-201ENST00000485777 579 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC016559.2-201ENST00000510759 359 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC079064.1-201ENST00000528365 362 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC124891.1-201ENST00000536322 519 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC025283.1-201ENST00000572039 734 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 PRPF19P1-201ENST00000584766 898 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 Z95327.3-201ENST00000610385 572 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AL035661.1-201ENST00000620459 1144 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC073869.7-201ENST00000640874 297 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 AC138627.1-204ENST00000641894 765 ntBASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
HLA-DQA1P01909 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.28□□□□□ -1.73
HLA-DQA1P01909 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
HLA-DQA1P01909 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HLA-DQA1P01909 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.27□□□□□ -1.73
HLA-DQA1P01909 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms