Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
PDGFBP01127 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDGFBP01127 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 RPL34P27-201ENST00000428810 349 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 VDAC1P6-201ENST00000430062 855 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.93□□□□□ -1.46
PDGFBP01127 LDHAP2-201ENST00000437325 985 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC006466.1-201ENST00000438721 289 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 LDHBP2-201ENST00000456969 1005 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC090638.1-201ENST00000498296 909 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFBP01127 NRBF2P4-201ENST00000520874 850 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AP004607.2-201ENST00000533949 322 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC079075.1-201ENST00000559543 878 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 MIR4697-201ENST00000582977 78 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 AC013731.1-201ENST00000604340 883 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AP002505.2-201ENST00000623585 696 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 AC010168.2-201ENST00000562691 5428 ntBASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFBP01127 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFBP01127 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFBP01127 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 AC105749.1-201ENST00000631338 2008 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDGFBP01127 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFBP01127 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 NFYAP1-201ENST00000431953 972 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFBP01127 RAB28P2-201ENST00000454299 641 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFBP01127 AC095057.1-201ENST00000507583 168 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.92□□□□□ -1.46
PDGFBP01127 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFBP01127 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDGFBP01127 AC022616.2-201ENST00000523185 300 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
PDGFBP01127 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 MIR3189-201ENST00000578735 73 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 MIR4480-201ENST00000582492 71 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 AL139099.4-201ENST00000614802 114 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFBP01127 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFBP01127 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 HDAC1P2-201ENST00000453661 1398 ntBASIC5.92□□□□□ -1.46
PDGFBP01127 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFBP01127 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
PDGFBP01127 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms