Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC124944.3-204ENST00000641191 150 ntBASIC5.84□□□□□ -1.47
PAX4O43316 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PAX4O43316 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PAX4O43316 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.84□□□□□ -1.47
PAX4O43316 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PAX4O43316 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PAX4O43316 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
PAX4O43316 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PAX4O43316 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PAX4O43316 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PAX4O43316 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
PAX4O43316 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
PAX4O43316 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 AC012618.3-205ENST00000637896 1496 ntBASIC5.83□□□□□ -1.48
PAX4O43316 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 CYP1D1P-201ENST00000416662 1433 ntBASIC5.83□□□□□ -1.48
PAX4O43316 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
PAX4O43316 NEPNP-201ENST00000404786 1371 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 HSPD1P4-201ENST00000547203 1702 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 AL512646.1-201ENST00000269395 1077 ntBASIC5.83□□□□□ -1.48
PAX4O43316 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 OR4D9-201ENST00000329328 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PAX4O43316 RN7SKP44-201ENST00000363602 316 ntBASIC5.83□□□□□ -1.48
PAX4O43316 Y_RNA.197-201ENST00000364004 102 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PAX4O43316 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PAX4O43316 NPM1P38-201ENST00000403835 865 ntBASIC5.83□□□□□ -1.48
PAX4O43316 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 RNA5SP118-201ENST00000410385 109 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC5.83□□□□□ -1.48
PAX4O43316 AC109780.2-201ENST00000413467 845 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 UQCRHP2-201ENST00000415651 288 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC5.83□□□□□ -1.48
PAX4O43316 RPL34P3-201ENST00000421454 338 ntBASIC5.83□□□□□ -1.48
PAX4O43316 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC007683.1-201ENST00000432746 591 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AL354761.1-201ENST00000434190 526 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC092013.1-201ENST00000438795 332 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AL137792.2-201ENST00000443484 235 ntBASIC5.83□□□□□ -1.48
PAX4O43316 SFTPA3P-201ENST00000446429 367 ntBASIC5.83□□□□□ -1.48
PAX4O43316 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 MTCO3P20-201ENST00000454926 688 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC096915.1-201ENST00000456185 512 ntBASIC5.83□□□□□ -1.48
PAX4O43316 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 RN7SL63P-201ENST00000468228 304 ntBASIC5.83□□□□□ -1.48
PAX4O43316 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 AC100843.1-201ENST00000475372 550 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC135999.1-201ENST00000478962 479 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC025674.1-201ENST00000507074 324 ntBASIC5.83□□□□□ -1.48
PAX4O43316 HMGB3P15-201ENST00000507326 574 ntBASIC5.83□□□□□ -1.48
PAX4O43316 MTCO3P44-201ENST00000510977 541 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC226119.2-201ENST00000513501 530 ntBASIC5.83□□□□□ -1.48
PAX4O43316 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.83□□□□□ -1.48
PAX4O43316 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 OR5B19P-201ENST00000531766 928 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AP002004.1-206ENST00000532441 876 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC005000.1-201ENST00000536192 288 ntBASIC5.83□□□□□ -1.48
PAX4O43316 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PAX4O43316 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.83□□□□□ -1.48
PAX4O43316 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.83□□□□□ -1.48
PAX4O43316 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms