Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.16□□□□□ -1.42
O00370 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
O00370 RN7SKP186-201ENST00000365371 303 ntBASIC6.16□□□□□ -1.42
O00370 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.16□□□□□ -1.42
O00370 AL035696.2-201ENST00000407941 709 ntBASIC6.16□□□□□ -1.42
O00370 AL357752.1-201ENST00000412817 349 ntBASIC6.16□□□□□ -1.42
O00370 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.16□□□□□ -1.42
O00370 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
O00370 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.16□□□□□ -1.42
O00370 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.16□□□□□ -1.42
O00370 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.16□□□□□ -1.42
O00370 RPL12P39-201ENST00000455456 496 ntBASIC6.16□□□□□ -1.42
O00370 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 RPS17P15-201ENST00000475609 349 ntBASIC6.16□□□□□ -1.42
O00370 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.16□□□□□ -1.42
O00370 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.16□□□□□ -1.42
O00370 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.16□□□□□ -1.42
O00370 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.16□□□□□ -1.42
O00370 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.16□□□□□ -1.42
O00370 AC090888.3-201ENST00000558917 509 ntBASIC6.16□□□□□ -1.42
O00370 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.16□□□□□ -1.42
O00370 AC060780.2-201ENST00000589047 198 ntBASIC6.16□□□□□ -1.42
O00370 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 MIR6778-201ENST00000617912 73 ntBASIC6.16□□□□□ -1.42
O00370 AC087821.1-201ENST00000623639 567 ntBASIC6.16□□□□□ -1.42
O00370 AP003072.5-201ENST00000623872 773 ntBASIC6.16□□□□□ -1.42
O00370 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 AC140479.2-201ENST00000421567 3130 ntBASIC6.16□□□□□ -1.42
O00370 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
O00370 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
O00370 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
O00370 BRAFP1-201ENST00000445336 2703 ntBASIC6.15□□□□□ -1.42
O00370 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
O00370 AP004607.3-201ENST00000530354 3915 ntBASIC6.15□□□□□ -1.42
O00370 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
O00370 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
O00370 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
O00370 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
O00370 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
O00370 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
O00370 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
O00370 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 OR7E101P-201ENST00000400428 513 ntBASIC6.15□□□□□ -1.42
O00370 HMGN1P20-201ENST00000411849 300 ntBASIC6.15□□□□□ -1.42
O00370 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 RPS27AP6-201ENST00000427962 448 ntBASIC6.15□□□□□ -1.42
O00370 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.15□□□□□ -1.42
O00370 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.15□□□□□ -1.42
O00370 SEPT14P1-201ENST00000458703 648 ntBASIC6.15□□□□□ -1.42
O00370 RNU1-88P-201ENST00000459274 128 ntBASIC6.15□□□□□ -1.42
O00370 AC011476.1-201ENST00000466725 307 ntBASIC6.15□□□□□ -1.42
O00370 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 AC105384.2-201ENST00000508433 640 ntBASIC6.15□□□□□ -1.42
O00370 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.15□□□□□ -1.42
O00370 AC139365.2-201ENST00000517972 253 ntBASIC6.15□□□□□ -1.42
O00370 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.15□□□□□ -1.42
O00370 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.15□□□□□ -1.42
O00370 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.15□□□□□ -1.42
O00370 ZNF322P1-201ENST00000568013 1209 ntBASIC6.15□□□□□ -1.42
O00370 AL163952.1-202ENST00000569625 600 ntBASIC6.15□□□□□ -1.42
O00370 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.15□□□□□ -1.42
O00370 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.15□□□□□ -1.42
O00370 MIR4433B-201ENST00000581329 102 ntBASIC6.15□□□□□ -1.42
O00370 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.15□□□□□ -1.42
O00370 AC027243.2-201ENST00000602530 724 ntBASIC6.15□□□□□ -1.42
O00370 FAM27E4-201ENST00000605259 342 ntBASIC6.15□□□□□ -1.42
O00370 AC015849.6-201ENST00000605454 474 ntBASIC6.15□□□□□ -1.42
O00370 AC022400.9-201ENST00000623633 273 ntBASIC6.15□□□□□ -1.42
O00370 AC018628.1-201ENST00000624147 3819 ntBASIC6.15□□□□□ -1.42
O00370 OR8G3P-202ENST00000641572 1255 ntBASIC6.15□□□□□ -1.42
O00370 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
O00370 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.15□□□□□ -1.43
O00370 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
O00370 AC114774.1-201ENST00000507410 1770 ntBASIC6.15□□□□□ -1.43
O00370 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.15□□□□□ -1.43
O00370 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
O00370 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
O00370 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 AC009962.1-201ENST00000567327 3813 ntBASIC6.14□□□□□ -1.43
O00370 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.14□□□□□ -1.43
O00370 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 NCOA4P2-201ENST00000340589 1813 ntBASIC6.14□□□□□ -1.43
O00370 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
O00370 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
O00370 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms