Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP146-201ENST00000410743 123 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 NRIR-202ENST00000414795 506 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RANP7-201ENST00000418085 644 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 EIF4A1P1-201ENST00000420241 934 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 E2F6P2-201ENST00000420708 748 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RBMY2YP-201ENST00000423333 912 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 PPIL1P1-201ENST00000423936 499 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 VN2R9P-201ENST00000431428 953 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090018.1-201ENST00000434369 367 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL606752.1-201ENST00000435442 666 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 CYP2C56P-201ENST00000440076 291 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL136455.1-201ENST00000441083 1240 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 E2F6P3-201ENST00000441743 743 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 GAPDHP33-201ENST00000443168 1013 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 GAPDHP23-201ENST00000444823 993 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RN7SL37P-201ENST00000490461 307 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP497-201ENST00000516081 97 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP228-201ENST00000516232 133 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MYL12AP1-201ENST00000518490 515 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL049869.4-201ENST00000555669 178 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 UBE2CP4-201ENST00000561405 535 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AP002884.5-201ENST00000595053 1132 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC091133.5-201ENST00000603088 301 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC141002.1-201ENST00000607025 279 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR8069-1-201ENST00000616627 86 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MRPL57P3-201ENST00000619218 176 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MIR8069-2-201ENST00000621412 86 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC005691.1-201ENST00000624723 401 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 SMG1P6-201ENST00000532337 2930 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 AC074029.4-201ENST00000624796 1859 ntBASIC3.01□□□□□ -1.93
CHKB-CPT1BH3BT56 OR4F13P-202ENST00000560066 2054 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC079248.1-201ENST00000427568 1546 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 RNA5SP132-201ENST00000364725 118 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 OR1L6-202ENST00000373684 1044 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AC091492.1-201ENST00000419844 272 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 RIMKLBP2-201ENST00000424737 654 ntBASIC3□□□□□ -1.93
CHKB-CPT1BH3BT56 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms