Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
HRH3Q9Y5N1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HRH3Q9Y5N1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.5
HRH3Q9Y5N1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
HRH3Q9Y5N1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 LINC01521-201ENST00000504184 1943 ntBASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HRH3Q9Y5N1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 HLA-G-202ENST00000376815 851 ntBASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 HLA-G-203ENST00000376818 1127 ntBASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 AC133681.1-201ENST00000465482 601 ntBASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HRH3Q9Y5N1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HRH3Q9Y5N1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
HRH3Q9Y5N1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms