Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDHGB1Q9Y5G3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHGB1Q9Y5G3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHGB1Q9Y5G3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L2-201ENST00000561772 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L6-201ENST00000626483 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L1-201ENST00000627662 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L8-201ENST00000629013 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L3-201ENST00000630187 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L7-201ENST00000630678 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 DUX4L5-201ENST00000630834 1275 ntBASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHGB1Q9Y5G3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHGB1Q9Y5G3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.96■□□□□ 0.46
PCDHGB1Q9Y5G3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PCDHGB1Q9Y5G3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms