Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AL031963.3-201ENST00000606441 850 ntBASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGB3Q9Y5G1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 AP000974.1-201ENST00000623909 2387 ntBASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 AC091874.3-201ENST00000512672 1195 ntBASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 AC098934.4-201ENST00000564127 592 ntBASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGB3Q9Y5G1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 TSPY20P-201ENST00000450910 630 ntBASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 FAM201B-201ENST00000458407 597 ntBASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 AC023632.3-201ENST00000521633 145 ntBASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 PTBP1P-201ENST00000554374 1601 ntBASIC18.6■□□□□ 0.57
PCDHGB3Q9Y5G1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
PCDHGB3Q9Y5G1 KRT17P1-201ENST00000399211 1546 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms