Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS9D1Q9Y2B5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS9D1Q9Y2B5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 AC083880.1-201ENST00000608266 535 ntBASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 AL121906.2-201ENST00000621597 723 ntBASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 AC006557.6-201ENST00000623071 864 ntBASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS9D1Q9Y2B5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AL158211.5-201ENST00000623583 2518 ntBASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 RPS2P52-201ENST00000469610 820 ntBASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VPS9D1Q9Y2B5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS9D1Q9Y2B5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS9D1Q9Y2B5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.52■□□□□ 0.71
VPS9D1Q9Y2B5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
VPS9D1Q9Y2B5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.52■□□□□ 0.71
VPS9D1Q9Y2B5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
VPS9D1Q9Y2B5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.51■□□□□ 0.71
VPS9D1Q9Y2B5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms