Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
COL17A1Q9UMD9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 AC233723.2-201ENST00000623798 2106 ntBASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
COL17A1Q9UMD9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL17A1Q9UMD9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 AP003041.3-201ENST00000527151 707 ntBASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 AP000523.1-201ENST00000398242 1049 ntBASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 AL732292.2-201ENST00000609649 430 ntBASIC29.93■■■□□ 2.38
COL17A1Q9UMD9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 KRT8P20-201ENST00000423953 1409 ntBASIC29.92■■■□□ 2.38
COL17A1Q9UMD9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 GCSHP2-201ENST00000560971 527 ntBASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 AC242852.2-201ENST00000615738 1807 ntBASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC29.91■■■□□ 2.38
COL17A1Q9UMD9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL17A1Q9UMD9 TFP1-202ENST00000475455 1573 ntBASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 TUBB8P6-201ENST00000436895 1288 ntBASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC29.89■■■□□ 2.38
COL17A1Q9UMD9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms