Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 NIFKP9-201ENST00000419265 221 ntBASIC20.83■□□□□ 0.93
CDH9Q9ULB4 TSPY7P-201ENST00000431358 1114 ntBASIC20.83■□□□□ 0.93
CDH9Q9ULB4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH9Q9ULB4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH9Q9ULB4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH9Q9ULB4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 CD177P1-201ENST00000606252 935 ntBASIC20.82■□□□□ 0.92
CDH9Q9ULB4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH9Q9ULB4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 KRT17P2-201ENST00000300992 1314 ntBASIC20.81■□□□□ 0.92
CDH9Q9ULB4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 KSR1P1-201ENST00000446298 240 ntBASIC20.81■□□□□ 0.92
CDH9Q9ULB4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 MIR4785-201ENST00000585005 73 ntBASIC20.81■□□□□ 0.92
CDH9Q9ULB4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDH9Q9ULB4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 FAM197Y1-201ENST00000421178 764 ntBASIC20.8■□□□□ 0.92
CDH9Q9ULB4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH9Q9ULB4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH9Q9ULB4 KRT8P8-201ENST00000434750 1448 ntBASIC20.78■□□□□ 0.92
CDH9Q9ULB4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDH9Q9ULB4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms