Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 AL121829.2-201ENST00000620908 328 ntBASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GTF3C4Q9UKN8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 KRASP1-201ENST00000407852 552 ntBASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 AC239809.2-201ENST00000415381 517 ntBASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GTF3C4Q9UKN8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GTF3C4Q9UKN8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 AC133681.1-201ENST00000465482 601 ntBASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.15■□□□□ 0.98
GTF3C4Q9UKN8 PRKY-204ENST00000533551 1019 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms