Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 FSCN1P1-201ENST00000568912 1481 ntBASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 FITM1-202ENST00000559294 800 ntBASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 NAPSB-206ENST00000562112 1266 ntBASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRIT1Q9P2V4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 LINC01568-207ENST00000641790 1380 ntBASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRIT1Q9P2V4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRIT1Q9P2V4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 AC026271.3-201ENST00000571884 352 ntBASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 AC005363.2-201ENST00000618631 242 ntBASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 AC131212.4-201ENST00000623606 975 ntBASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRIT1Q9P2V4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LRIT1Q9P2V4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19■□□□□ 0.63
LRIT1Q9P2V4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 TMPOP1-202ENST00000424642 1267 ntBASIC19■□□□□ 0.63
LRIT1Q9P2V4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRIT1Q9P2V4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19■□□□□ 0.63
LRIT1Q9P2V4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19■□□□□ 0.63
LRIT1Q9P2V4 GRAMD4P8-201ENST00000605465 1115 ntBASIC19■□□□□ 0.63
LRIT1Q9P2V4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19■□□□□ 0.63
LRIT1Q9P2V4 CYP2D8P-201ENST00000433633 1490 ntBASIC19■□□□□ 0.63
LRIT1Q9P2V4 BX119927.1-201ENST00000636596 1552 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms