Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 CNN2P6-201ENST00000439038 900 ntBASIC19.42■□□□□ 0.7
MKS1Q9NXB0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 TEX21P-204ENST00000641479 1693 ntBASIC19.42■□□□□ 0.7
MKS1Q9NXB0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 AC006333.2-201ENST00000607957 2099 ntBASIC19.42■□□□□ 0.7
MKS1Q9NXB0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MKS1Q9NXB0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 AC116351.2-201ENST00000606540 1585 ntBASIC19.41■□□□□ 0.7
MKS1Q9NXB0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MKS1Q9NXB0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 C2orf69P4-201ENST00000565394 541 ntBASIC19.4■□□□□ 0.7
MKS1Q9NXB0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 AC018553.1-201ENST00000616682 1458 ntBASIC19.4■□□□□ 0.7
MKS1Q9NXB0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
MKS1Q9NXB0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MKS1Q9NXB0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MKS1Q9NXB0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 NTF6G-201ENST00000591094 616 ntBASIC19.39■□□□□ 0.69
MKS1Q9NXB0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MKS1Q9NXB0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms