Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.49■□□□□ 0.87
HCFC1R1Q9NWW0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AP000692.2-201ENST00000608391 879 ntBASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 FAM87A-204ENST00000613235 858 ntBASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1R1Q9NWW0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 TMEM179-206ENST00000616017 1645 ntBASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1R1Q9NWW0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1R1Q9NWW0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 AC004951.3-201ENST00000418645 1148 ntBASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 BX119927.1-201ENST00000636596 1552 ntBASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HCFC1R1Q9NWW0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 AC128688.1-201ENST00000487626 519 ntBASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 AC087388.1-201ENST00000571370 1112 ntBASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms