Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC079140.4-201ENST00000507448 529 ntBASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 AC093827.2-201ENST00000512654 315 ntBASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 AL050303.2-201ENST00000619798 666 ntBASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCM2LQ9NUG4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.67■□□□□ 0.58
CCM2LQ9NUG4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 MFSD11-216ENST00000590393 1141 ntBASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.66■□□□□ 0.58
CCM2LQ9NUG4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 KRT87P-202ENST00000534226 1464 ntBASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 AL138781.1-201ENST00000566567 1274 ntBASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CCM2LQ9NUG4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCM2LQ9NUG4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCM2LQ9NUG4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.64■□□□□ 0.58
CCM2LQ9NUG4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCM2LQ9NUG4 AC120498.9-201ENST00000339021 3867 ntBASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SLC29A4P1-201ENST00000398760 971 ntBASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2LQ9NUG4 FAM21FP-204ENST00000608637 956 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms