Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX4Q9NQI0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX4Q9NQI0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX4Q9NQI0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 INGX-201ENST00000359239 846 ntBASIC23.29■■□□□ 1.32
DDX4Q9NQI0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 AC097488.1-201ENST00000507834 756 ntBASIC23.29■■□□□ 1.32
DDX4Q9NQI0 KRT18P35-201ENST00000510488 1269 ntBASIC23.29■■□□□ 1.32
DDX4Q9NQI0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX4Q9NQI0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX4Q9NQI0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 CRYGFP-201ENST00000418459 633 ntBASIC23.27■■□□□ 1.32
DDX4Q9NQI0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 AC010203.1-204ENST00000548782 407 ntBASIC23.27■■□□□ 1.32
DDX4Q9NQI0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.27■■□□□ 1.32
DDX4Q9NQI0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX4Q9NQI0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
DDX4Q9NQI0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 AP000692.2-201ENST00000608391 879 ntBASIC23.26■■□□□ 1.31
DDX4Q9NQI0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 AP005212.1-201ENST00000581547 1997 ntBASIC23.26■■□□□ 1.31
DDX4Q9NQI0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX4Q9NQI0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 FEM1AP1-201ENST00000431297 1995 ntBASIC23.25■■□□□ 1.31
DDX4Q9NQI0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ECEL1P2-202ENST00000465689 757 ntBASIC23.25■■□□□ 1.31
DDX4Q9NQI0 Z85996.1-201ENST00000494644 937 ntBASIC23.25■■□□□ 1.31
DDX4Q9NQI0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 AC011298.2-201ENST00000617989 482 ntBASIC23.25■■□□□ 1.31
DDX4Q9NQI0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 AL391422.3-201ENST00000603791 2761 ntBASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX4Q9NQI0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 TSPY14P-201ENST00000303979 915 ntBASIC23.24■■□□□ 1.31
DDX4Q9NQI0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX4Q9NQI0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms