Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 AC018553.1-201ENST00000616682 1458 ntBASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.64■□□□□ 0.57
SLC52A3Q9NQ40 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 AC141586.3-201ENST00000562166 1838 ntBASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 CYP2T1P-201ENST00000432607 1285 ntBASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 MIR5787-201ENST00000611784 55 ntBASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 AC116351.2-201ENST00000606540 1585 ntBASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC52A3Q9NQ40 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 AC010980.2-201ENST00000587099 1412 ntBASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC52A3Q9NQ40 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 KRT17P1-201ENST00000399211 1546 ntBASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 AC137761.2-201ENST00000561729 223 ntBASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 AC145350.3-201ENST00000569033 163 ntBASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC52A3Q9NQ40 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms