Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 BX119927.1-201ENST00000636596 1552 ntBASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 LINC01465-201ENST00000408887 1940 ntBASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 EDA-201ENST00000338901 1233 ntBASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AL354811.1-201ENST00000610286 706 ntBASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SND1-IT1Q9HBX3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SND1-IT1Q9HBX3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.15□□□□□ -0.31
SND1-IT1Q9HBX3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.15□□□□□ -0.31
SND1-IT1Q9HBX3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SND1-IT1Q9HBX3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 KRT8P36-201ENST00000489121 1440 ntBASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 AC007613.1-201ENST00000572811 2597 ntBASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 AC096631.2-201ENST00000436136 790 ntBASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SND1-IT1Q9HBX3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms