Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRTM1Q9HBL6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRTM1Q9HBL6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRTM1Q9HBL6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.89■□□□□ 0.62
LRTM1Q9HBL6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 AF201337.1-201ENST00000520239 748 ntBASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 IKBKGP1-201ENST00000612193 1073 ntBASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 AL050303.2-201ENST00000619798 666 ntBASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.89■□□□□ 0.61
LRTM1Q9HBL6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 BX276092.2-201ENST00000417668 665 ntBASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 CDCA4P2-201ENST00000441182 718 ntBASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 AC018553.1-201ENST00000616682 1458 ntBASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRTM1Q9HBL6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 AL032819.2-201ENST00000624543 2162 ntBASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LRTM1Q9HBL6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms