Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.36■■□□□ 1.01
CDT1Q9H211 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.36■■□□□ 1.01
CDT1Q9H211 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.36■■□□□ 1.01
CDT1Q9H211 AC073195.1-201ENST00000607241 877 ntBASIC21.36■■□□□ 1.01
CDT1Q9H211 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDT1Q9H211 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDT1Q9H211 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CDT1Q9H211 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDT1Q9H211 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.35■■□□□ 1.01
CDT1Q9H211 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.35■■□□□ 1.01
CDT1Q9H211 NIFKP9-201ENST00000419265 221 ntBASIC21.35■■□□□ 1.01
CDT1Q9H211 FAM197Y1-201ENST00000421178 764 ntBASIC21.35■■□□□ 1.01
CDT1Q9H211 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.35■■□□□ 1.01
CDT1Q9H211 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.35■■□□□ 1.01
CDT1Q9H211 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CDT1Q9H211 CD177P1-201ENST00000606252 935 ntBASIC21.35■■□□□ 1.01
CDT1Q9H211 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDT1Q9H211 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CDT1Q9H211 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.35■■□□□ 1.01
CDT1Q9H211 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.34■■□□□ 1.01
CDT1Q9H211 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.34■■□□□ 1.01
CDT1Q9H211 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDT1Q9H211 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.34■■□□□ 1.01
CDT1Q9H211 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.34■■□□□ 1.01
CDT1Q9H211 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
CDT1Q9H211 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDT1Q9H211 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.34■■□□□ 1.01
CDT1Q9H211 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDT1Q9H211 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
CDT1Q9H211 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.33■■□□□ 1.01
CDT1Q9H211 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDT1Q9H211 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDT1Q9H211 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDT1Q9H211 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDT1Q9H211 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDT1Q9H211 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDT1Q9H211 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.33■■□□□ 1.01
CDT1Q9H211 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.33■■□□□ 1.01
CDT1Q9H211 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.33■■□□□ 1.01
CDT1Q9H211 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDT1Q9H211 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDT1Q9H211 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDT1Q9H211 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.33■■□□□ 1
CDT1Q9H211 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.33■■□□□ 1
CDT1Q9H211 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CDT1Q9H211 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDT1Q9H211 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CDT1Q9H211 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.32■■□□□ 1
CDT1Q9H211 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.32■■□□□ 1
CDT1Q9H211 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.32■■□□□ 1
CDT1Q9H211 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.32■■□□□ 1
CDT1Q9H211 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CDT1Q9H211 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CDT1Q9H211 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDT1Q9H211 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CDT1Q9H211 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.31■■□□□ 1
CDT1Q9H211 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.31■■□□□ 1
CDT1Q9H211 KSR1P1-201ENST00000446298 240 ntBASIC21.31■■□□□ 1
CDT1Q9H211 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.31■■□□□ 1
CDT1Q9H211 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDT1Q9H211 MIR4785-201ENST00000585005 73 ntBASIC21.31■■□□□ 1
CDT1Q9H211 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.31■■□□□ 1
CDT1Q9H211 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.31■■□□□ 1
CDT1Q9H211 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CDT1Q9H211 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms