Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC5.31□□□□□ -1.56
LCE3DQ9BYE3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PWWP2AP1-201ENST00000429776 2273 ntBASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 AC068587.6-202ENST00000641839 5619 ntBASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MIR4787-201ENST00000607364 84 ntBASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 FZD10-202ENST00000539839 3282 ntBASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LCE3DQ9BYE3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 LTB4R2-202ENST00000528054 3092 ntBASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LCE3DQ9BYE3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms